RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 ANKDD1BA6NHY2 528 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 LRRC14BA6NHZ5 514 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 HAT1O14929 419 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 BIRC5O15392 142 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 NDUFS4O43181 175 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 SRPX2O60687 465 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-208ENST00000538266 UGDHO60701 494 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 PRAMEF10O60809 474 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 CTSVO60911 334 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 FAM20BO75063 409 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 CLDN9O95484 217 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 CBX6O95503 412 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 HSPA4LO95757 839 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 CHEK2O96017 543 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 KRT6AP02538 564 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 KRT6BP04259 564 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 SERPINE1P05121 402 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 SERPIND1P05546 499 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 KLK3P07288 261 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-208ENST00000538266 RPS17P08708 135 aaKnown RBP4.08□□□□□ -1.76
SNHG1-208ENST00000538266 HBQ1P09105 142 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 SBK3P0C264 359 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 FGF3P11487 239 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-208ENST00000538266 PCNAP12004 261 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 CCL4P13236 92 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 ITIH1P19827 911 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 IMPDH1P20839 514 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 PTPRBP23467 1997 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 HMOX2P30519 316 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 SERPINB1P30740 379 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 APOBEC3AP31941 199 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-208ENST00000538266 AHRP35869 848 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 HNF4AP41235 474 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 KRT6CP48668 564 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 NAGLUP54802 743 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 CDH13P55290 713 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 PKNOX1P55347 436 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 VSX2P58304 361 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-208ENST00000538266 DNAJB13P59910 316 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 SKP1P63208 163 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 CYP4F2P78329 520 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 CSNK1G2P78368 415 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 REEP5Q00765 189 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 MC2RQ01718 297 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 RELAQ04206 551 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 SLC34A1Q06495 639 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 TGM3Q08188 693 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 LCP2Q13094 533 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 CHIT1Q13231 466 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 DYNC1I2Q13409 638 aaKnown RBP4.08□□□□□ -1.76
SNHG1-208ENST00000538266 FOXE3Q13461 319 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 DOC2AQ14183 400 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 RCN2Q14257 317 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 RAB39AQ14964 217 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 KRT72Q14CN4 511 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 PCLAFQ15004 111 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 RCN1Q15293 331 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 CHI3L2Q15782 390 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 TBCCQ15814 346 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 ZIC1Q15915 447 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 PDCD2Q16342 344 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-208ENST00000538266 GSTA3Q16772 222 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 NDUFA9Q16795 377 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 PGS1Q32NB8 556 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 TCTE1Q5JU00 501 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 ZNF678Q5SXM1 525 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 C10orf62Q5T681 223 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-208ENST00000538266 C6orf163Q5TEZ5 329 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 LIPJQ5W064 366 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 FAM91A1Q658Y4 838 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 FCRL6Q6DN72 434 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 GRHL2Q6ISB3 625 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 ZNF425Q6IV72 752 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 MED27Q6P2C8 311 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 TMEM154Q6P9G4 183 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 TMIGD1Q6UXZ0 262 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 LRRC74BQ6ZQY2 392 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 SEM1Q6ZVN7 128 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 RNF44Q7L0R7 432 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 CLNKQ7Z7G1 428 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 PAQR7Q86WK9 346 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 MARCH9Q86YJ5 346 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 NUDCD3Q8IVD9 361 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 C10orf107Q8IVU9 208 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 KLHDC8AQ8IYD2 350 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 CSNK1A1LQ8N752 337 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 TTC29Q8NA56 475 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-208ENST00000538266 TRPV3Q8NET8 790 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 OR52B6Q8NGF0 335 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 TRPC4APQ8TEL6 797 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 ZFAND2BQ8WV99 257 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 ZNF75CPQ92670 426 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-208ENST00000538266 CLIP3Q96DZ5 547 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 DTNBP1Q96EV8 351 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 CNDP1Q96KN2 507 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 LRGUKQ96M69 825 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 FCRL4Q96PJ5 515 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 DCLRE1CQ96SD1 692 aaKnown RBP4.08□□□□□ -1.76
SNHG1-208ENST00000538266 ZNF382Q96SR6 550 aa4.08□□□□□ -1.76
SNHG1-208ENST00000538266 CTRCQ99895 268 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms