RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 CASP3P42574 277 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 LHX2P50458 406 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 HADHBP55084 474 aaKnown RBP7.46□□□□□ -1.22
CLIP1-206ENST00000535290 GFRA1P56159 465 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 CLDN18P56856 261 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 STXBP1P61764 594 aaKnown RBP7.46□□□□□ -1.22
CLIP1-206ENST00000535290 DHX9Q08211 1270 aaKnown RBP7.46□□□□□ -1.22
CLIP1-206ENST00000535290 GPS1Q13098 491 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 EXOC3L2Q2M3D2 409 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 ELOA3BQ3SY89 546 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 MSS51Q4VC12 460 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 DUPD1Q68J44 220 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 ALKBH2Q6NS38 261 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 SCIMPQ6UWF3 145 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 P4HA3Q7Z4N8 544 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 CILP2Q8IUL8 1156 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 RFLNBQ8N5W9 214 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 C3orf56Q8N813 242 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 ELOA3Q8NG57 546 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 RDH11Q8TC12 318 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 EEF1AKMT1Q8WVE0 214 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 ALG3Q92685 438 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 IQCDQ96DY2 449 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 TMEM41AQ96HV5 264 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 AIF1LQ9BQI0 150 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 NTMT1Q9BV86 223 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 WWTR1Q9GZV5 400 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 MANSC1Q9H8J5 431 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 EML4Q9HC35 981 aaKnown RBP7.46□□□□□ -1.22
CLIP1-206ENST00000535290 SERHLQ9NQF3 203 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 KCNS2Q9ULS6 477 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 TFR2Q9UP52 801 aa7.46□□□□□ -1.22
CLIP1-206ENST00000535290 YLPM1P49750 1951 aaKnown RBP7.46□□□□□ -1.22
CLIP1-206ENST00000535290 A0A1W2PP18 115 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 TCRBV7S2A1N4TA0A589 114 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 SLC22A20A6NK97 555 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 SMTNL1A8MU46 457 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 EMC8O43402 210 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 FGF17O60258 216 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 KIAA0513O60268 411 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 C8GP07360 202 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 ETS1P14921 441 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 PPP3CBP16298 524 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 ZNF708P17019 499 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 PTNP21246 168 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 FDFT1P37268 417 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 STT3AP46977 705 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 NUDT6P53370 316 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 EBPQ15125 230 aaKnown RBP7.45□□□□□ -1.22
CLIP1-206ENST00000535290 CYP1B1Q16678 543 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 KBTBD12Q3ZCT8 623 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 PRR31Q5SQ13 230 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 OR2A2Q6IF42 318 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 FAM166AQ6J272 317 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 C11orf63Q6NUN7 778 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 NEPROQ6NW34 567 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 NXPE4Q6UWF7 544 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 ANGPTL8Q6UXH0 198 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 STAC2Q6ZMT1 411 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 TMPRSS11BQ86T26 416 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 ANKMY2Q8IV38 441 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 DENND6AQ8IWF6 608 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 OR1J4Q8NGS1 313 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 OR14L1PQ8NHC6 308 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 CCT6BQ92526 530 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 FIG4Q92562 907 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 C11orf24Q96F05 449 aaPredicted RBP7.45□□□□□ -1.22
CLIP1-206ENST00000535290 FBXL20Q96IG2 436 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 CCDC42Q96M95 316 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 SERINC2Q96SA4 455 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 DNAJC7Q99615 494 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 BPIFA3Q9BQP9 254 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 TRAF4Q9BUZ4 470 aaPredicted RBP7.45□□□□□ -1.22
CLIP1-206ENST00000535290 KIFC1Q9BW19 673 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 IL22Q9GZX6 179 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 NAT10Q9H0A0 1025 aaKnown RBP7.45□□□□□ -1.22
CLIP1-206ENST00000535290 NHEJ1Q9H9Q4 299 aaPredicted RBP7.45□□□□□ -1.22
CLIP1-206ENST00000535290 PELI2Q9HAT8 420 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 RAB6BQ9NRW1 208 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 LMBRD1Q9NUN5 540 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 ARL15Q9NXU5 204 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 RNF112Q9ULX5 631 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 B3GALT5Q9Y2C3 310 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 DLGAP4Q9Y2H0 992 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 RNF115Q9Y4L5 304 aa7.45□□□□□ -1.22
CLIP1-206ENST00000535290 LOC100289279A0A1B0GTE1 492 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 IQANK1A0A1B0GTG1 560 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 BTNL10A8MVZ5 291 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 CDC7O00311 574 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 VENTXO95231 258 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 FTCDO95954 541 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 IFNB1P01574 187 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 CLPSP04118 112 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 COX7A2P14406 83 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 MGAT1P26572 445 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 COMPP49747 757 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-206ENST00000535290 SLC37A1P57057 533 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 UBASH3AP57075 661 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 HERVK_113P63132 956 aa7.44□□□□□ -1.22
CLIP1-206ENST00000535290 ERVK-8P63133 956 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms