RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 COX20Q5RI15 118 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 PAPD5Q8NDF8 572 aaKnown RBP17.4■□□□□ 0.38
SMPD1-208ENST00000533123 OR10Q1Q8NGQ4 319 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 CSF3RQ99062 836 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 STRADBQ9C0K7 418 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 CHST8Q9H2A9 424 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 LYARQ9NX58 379 aaKnown RBP17.4■□□□□ 0.38
SMPD1-208ENST00000533123 TAS2R9Q9NYW1 312 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 HCN3Q9P1Z3 774 aa17.4■□□□□ 0.38
SMPD1-208ENST00000533123 WBP11Q9Y2W2 641 aaKnown RBP17.4■□□□□ 0.38
SMPD1-208ENST00000533123 POLR1CO15160 346 aaPredicted RBP17.39■□□□□ 0.37
SMPD1-208ENST00000533123 AIFM1O95831 613 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 SERPINA1P01009 418 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 ITIH1P19827 911 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 FASP25445 335 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 AVPR1BP47901 424 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 RGNQ15493 299 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 SYT16Q17RD7 645 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 C1orf189Q5VU69 101 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 CA13Q8N1Q1 262 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 MAL2Q969L2 176 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 SLC7A5P2Q9GIP4 190 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 COQ10BQ9H8M1 238 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 AKAP7Q9P0M2 348 aaPredicted RBP17.39■□□□□ 0.37
SMPD1-208ENST00000533123 UTS2RQ9UKP6 389 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 CLCA2Q9UQC9 943 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 SAC3D1A6NKF1 404 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 PGRMC2O15173 223 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 GUCY1B2O75343 617 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 SCRG1O75711 98 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 BMP2P12643 396 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 CPN2P22792 545 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 SOAT1P35610 550 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 GSTM5P46439 218 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 OR1D4P47884 311 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 MVDP53602 400 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 ARSFP54793 590 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 IL11RAQ14626 422 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 VMACQ2NL98 169 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 SLC38A9Q8NBW4 561 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.39■□□□□ 0.37
SMPD1-208ENST00000533123 PMEPA1Q969W9 287 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 CXorf36Q9H7Y0 433 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 DCAF13Q9NV06 445 aaKnown RBP17.39■□□□□ 0.37
SMPD1-208ENST00000533123 LOXL2Q9Y4K0 774 aa17.39■□□□□ 0.37
SMPD1-208ENST00000533123 PDPK1O15530 556 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 CHST10O43529 356 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 PRKD3O94806 890 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 DKK1O94907 266 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 FGF5P12034 268 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 ZNF26P17031 533 aaPredicted RBP17.38■□□□□ 0.37
SMPD1-208ENST00000533123 SKP1P63208 163 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 SHC2P98077 582 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 MC2RQ01718 297 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 NRF1Q16656 503 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 CPZQ66K79 652 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 RAB11FIP2Q7L804 512 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 EPHX4Q8IUS5 362 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 ANKFN1Q8N957 763 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 CATSPER1Q8NEC5 780 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 NR1H4Q96RI1 486 aaPredicted RBP17.38■□□□□ 0.37
SMPD1-208ENST00000533123 SLC29A1Q99808 456 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 FAIM2Q9BWQ8 316 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 NPLQ9BXD5 320 aaPredicted RBP17.38■□□□□ 0.37
SMPD1-208ENST00000533123 LYRM4Q9HD34 91 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 PHF11Q9UIL8 331 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 SNX8Q9Y5X2 465 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 FER1L5A0AVI2 2057 aa17.38■□□□□ 0.37
SMPD1-208ENST00000533123 PMS2P1A4D2B8 440 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 FAM227AF5H4B4 570 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 CDK4P11802 303 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 CEACAM1P13688 526 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 CRATP43155 626 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 NOVA1P51513 510 aaKnown RBP17.37■□□□□ 0.37
SMPD1-208ENST00000533123 NIPAL1Q6NVV3 410 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 DEPDC7Q96QD5 511 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 FBXO8Q9NRD0 319 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 ETAA1Q9NY74 926 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 GMEB1Q9Y692 573 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 A0A1B0GX78 115 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 H0YIG0 161 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 TMX2-CTNND1H3BSU7 103 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 DSCR3O14972 297 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 TBX19O60806 448 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 ETFAP13804 333 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 DRD2P14416 443 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 PPIBP23284 216 aaKnown RBP17.37■□□□□ 0.37
SMPD1-208ENST00000533123 BUD31P41223 144 aaPredicted RBP17.37■□□□□ 0.37
SMPD1-208ENST00000533123 PCBP4P57723 403 aaKnown RBP17.37■□□□□ 0.37
SMPD1-208ENST00000533123 TNFRSF17Q02223 184 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 HSPB3Q12988 150 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 FAM98BQ52LJ0 330 aaKnown RBP17.37■□□□□ 0.37
SMPD1-208ENST00000533123 LRRC23Q53EV4 343 aaPredicted RBP17.37■□□□□ 0.37
SMPD1-208ENST00000533123 YOD1Q5VVQ6 348 aaPredicted RBP17.37■□□□□ 0.37
SMPD1-208ENST00000533123 RHBDD2Q6NTF9 364 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 BPHLQ86WA6 291 aaPredicted RBP17.37■□□□□ 0.37
SMPD1-208ENST00000533123 TRIML2Q8N7C3 387 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 MVB12AQ96EY5 273 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 PEX11GQ96HA9 241 aa17.37■□□□□ 0.37
SMPD1-208ENST00000533123 RBCK1Q9BYM8 510 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms