RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 CCDC120Q96HB5 630 aa27.98■■■□□ 2.07
SSSCA1-207ENST00000533115 SACM1LQ9NTJ5 587 aa27.98■■■□□ 2.07
SSSCA1-207ENST00000533115 RYDENQ9NUL5 291 aaKnown RBP27.98■■■□□ 2.07
SSSCA1-207ENST00000533115 A0A0G2JMM0 328 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 A0A1W2PPB8 328 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 A0A1W2PRS3 328 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 SERTM1A2A2V5 107 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 GOLGA6L10A6NI86 522 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 KIR3DP1A8MWS1 328 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 G3V3Y1 287 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 ZNHIT1O43257 154 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 P04436 131 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 NUDT17P0C025 328 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 CPA3P15088 417 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 NT5EP21589 574 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 COL8A1P27658 744 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 HMGCS1Q01581 520 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 CMPK2Q5EBM0 449 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 C6orf163Q5TEZ5 329 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 FAM173AQ9BQD7 235 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 OXSMQ9NWU1 459 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 PSME2Q9UL46 239 aa27.97■■■□□ 2.07
SSSCA1-207ENST00000533115 H3BQF6 201 aa27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 ERAL1O75616 437 aaKnown RBP27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 CCL3P10147 92 aa27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 FOXA1P55317 472 aa27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 RAE1P78406 368 aaKnown RBP27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 PLGLB1Q02325 96 aa27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 SPIN4Q56A73 249 aa27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 CFAP157Q5JU67 520 aa27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 GK5Q6ZS86 529 aa27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 FAM47EQ6ZV65 393 aa27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 FGD2Q7Z6J4 655 aa27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 DND1Q8IYX4 353 aaKnown RBP27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 RIBC1Q8N443 379 aaPredicted RBP27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 OR52N2Q8NGI0 321 aa27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 KLHL29Q96CT2 875 aa27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 SPACA9Q96E40 222 aaPredicted RBP27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 APIPQ96GX9 242 aa27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 UNC79Q9P2D8 2635 aa27.96■■■□□ 2.07
SSSCA1-207ENST00000533115 C2orf92A0A1B0GVN3 265 aa27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 PCDH7O60245 1069 aa27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 ZNF500O60304 480 aaPredicted RBP27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 CDC40O60508 579 aaKnown RBP eCLIP27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 SLU7O95391 586 aaKnown RBP27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 CSNK2A2P19784 350 aaPredicted RBP27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 ALDH9A1P49189 494 aa27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 PPIAP62937 165 aaKnown RBP27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 ACSM2AQ08AH3 577 aa27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 ACSM2BQ68CK6 577 aa27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 SCIMPQ6UWF3 145 aa27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 RGS9BPQ6ZS82 235 aa27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 ZNF615Q8N8J6 731 aa27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 ZNF441Q8N8Z8 693 aa27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 AENQ8WTP8 325 aaKnown RBP27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 TTTY12Q9BZ98 90 aa27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 OR10A5Q9H207 317 aa27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 SH2D2AQ9NP31 389 aa27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 GTF3C1Q12789 2109 aa27.95■■■□□ 2.06
SSSCA1-207ENST00000533115 EML6Q6ZMW3 1958 aa27.94■■■□□ 2.06
SSSCA1-207ENST00000533115 ACOT7O00154 380 aa27.94■■■□□ 2.06
SSSCA1-207ENST00000533115 ATP1B1P05026 303 aa27.94■■■□□ 2.06
SSSCA1-207ENST00000533115 FBXO45P0C2W1 286 aa27.94■■■□□ 2.06
SSSCA1-207ENST00000533115 ESRRAP11474 423 aaPredicted RBP27.94■■■□□ 2.06
SSSCA1-207ENST00000533115 SERPINB3P29508 390 aa27.94■■■□□ 2.06
SSSCA1-207ENST00000533115 FEN1P39748 380 aaKnown RBP27.94■■■□□ 2.06
SSSCA1-207ENST00000533115 SLC22A10Q63ZE4 541 aa27.94■■■□□ 2.06
SSSCA1-207ENST00000533115 WDR93Q6P2C0 686 aa27.94■■■□□ 2.06
SSSCA1-207ENST00000533115 TAGAPQ8N103 731 aa27.94■■■□□ 2.06
SSSCA1-207ENST00000533115 OR7G1Q8NGA0 311 aa27.94■■■□□ 2.06
SSSCA1-207ENST00000533115 ITLN2Q8WWU7 325 aaPredicted RBP27.94■■■□□ 2.06
SSSCA1-207ENST00000533115 TP53INP1Q96A56 240 aa27.94■■■□□ 2.06
SSSCA1-207ENST00000533115 PLSCR2Q9NRY7 297 aa27.94■■■□□ 2.06
SSSCA1-207ENST00000533115 HEY2Q9UBP5 337 aa27.94■■■□□ 2.06
SSSCA1-207ENST00000533115 MID2Q9UJV3 735 aa27.94■■■□□ 2.06
SSSCA1-207ENST00000533115 DLGAP4Q9Y2H0 992 aa27.94■■■□□ 2.06
SSSCA1-207ENST00000533115 A0A1B0GTH9 108 aa27.93■■■□□ 2.06
SSSCA1-207ENST00000533115 GNG14A0A1W2PPG7 69 aa27.93■■■□□ 2.06
SSSCA1-207ENST00000533115 FAM166BA8MTA8 275 aa27.93■■■□□ 2.06
SSSCA1-207ENST00000533115 GLSO94925 669 aaPredicted RBP27.93■■■□□ 2.06
SSSCA1-207ENST00000533115 IL3P08700 152 aa27.93■■■□□ 2.06
SSSCA1-207ENST00000533115 S1PR1P21453 382 aa27.93■■■□□ 2.06
SSSCA1-207ENST00000533115 BTKQ06187 659 aa27.93■■■□□ 2.06
SSSCA1-207ENST00000533115 PRICKLE4Q2TBC4 344 aa27.93■■■□□ 2.06
SSSCA1-207ENST00000533115 LIPMQ5VYY2 423 aa27.93■■■□□ 2.06
SSSCA1-207ENST00000533115 HLA-DQA1Q5Y7H0 255 aa27.93■■■□□ 2.06
SSSCA1-207ENST00000533115 EMBQ6PCB8 327 aa27.93■■■□□ 2.06
SSSCA1-207ENST00000533115 SLC22A16Q86VW1 577 aa27.93■■■□□ 2.06
SSSCA1-207ENST00000533115 PAQR8Q8TEZ7 354 aa27.93■■■□□ 2.06
SSSCA1-207ENST00000533115 C11orf24Q96F05 449 aaPredicted RBP27.93■■■□□ 2.06
SSSCA1-207ENST00000533115 DEFB127Q9H1M4 99 aa27.93■■■□□ 2.06
SSSCA1-207ENST00000533115 MKS1Q9NXB0 559 aa27.93■■■□□ 2.06
SSSCA1-207ENST00000533115 ZNF780BQ9Y6R6 833 aa27.93■■■□□ 2.06
SSSCA1-207ENST00000533115 PRRG2O14669 202 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 DRD2P14416 443 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 TIA1P31483 386 aaKnown RBP eCLIP27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 PTGS2P35354 604 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 DNASE1L1P49184 302 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 NR0B1P51843 470 aaKnown RBP27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 IFFO1Q0D2I5 559 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms