RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 SLC34A3Q8N130 599 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 C1orf52Q8N6N3 182 aaKnown RBP15.92■□□□□ 0.14
PHRF1-204ENST00000532550 GBP7Q8N8V2 638 aaPredicted RBP15.92■□□□□ 0.14
PHRF1-204ENST00000532550 CHTF18Q8WVB6 975 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 ITLN2Q8WWU7 325 aaPredicted RBP15.92■□□□□ 0.14
PHRF1-204ENST00000532550 FAIM2Q9BWQ8 316 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 WWTR1Q9GZV5 400 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 MEMO1Q9Y316 297 aa15.92■□□□□ 0.14
PHRF1-204ENST00000532550 NINQ8N4C6 2090 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 A0A1W2PS29 197 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 GOLGA6L10A6NI86 522 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 FOXO6A8MYZ6 492 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 ERAL1O75616 437 aaKnown RBP15.91■□□□□ 0.14
PHRF1-204ENST00000532550 ESRRBO95718 433 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 ENO1P06733 434 aaKnown RBP15.91■□□□□ 0.14
PHRF1-204ENST00000532550 SSTR4P31391 388 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 CRHR1P34998 444 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 ZNF791Q3KP31 576 aaPredicted RBP15.91■□□□□ 0.14
PHRF1-204ENST00000532550 SLC48A1Q6P1K1 146 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 ARHGAP11AQ6P4F7 1023 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 ZYG11AQ6WRX3 759 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 SH2D5Q6ZV89 423 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 CHERPQ8IWX8 916 aaKnown RBP15.91■□□□□ 0.14
PHRF1-204ENST00000532550 AGAP11Q8TF27 550 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 SPACA9Q96E40 222 aaPredicted RBP15.91■□□□□ 0.14
PHRF1-204ENST00000532550 TTTY12Q9BZ98 90 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 OR10A5Q9H207 317 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 MID1IP1Q9NPA3 183 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 CES1P1Q9UKY3 287 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 EMCNQ9ULC0 261 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 TIMM22Q9Y584 194 aa15.91■□□□□ 0.14
PHRF1-204ENST00000532550 FAM166BA8MTA8 275 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 CAPN14A8MX76 684 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 G3V2L1 256 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 COPEO14579 308 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 NADKO95544 446 aaPredicted RBP15.9■□□□□ 0.14
PHRF1-204ENST00000532550 TPOP07202 933 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 CT62P0C5K7 136 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 CCL3P10147 92 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 CSNK2A2P19784 350 aaPredicted RBP15.9■□□□□ 0.14
PHRF1-204ENST00000532550 FEN1P39748 380 aaKnown RBP15.9■□□□□ 0.14
PHRF1-204ENST00000532550 DNASE1L1P49184 302 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 ALDH9A1P49189 494 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 FUT7Q11130 342 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 EBPQ15125 230 aaKnown RBP15.9■□□□□ 0.14
PHRF1-204ENST00000532550 FAM219BQ5XKK7 198 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 FGD2Q7Z6J4 655 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 CCDC63Q8NA47 563 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 FAM13CQ8NE31 585 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 OR7G1Q8NGA0 311 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 FAM57AQ8TBR7 257 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 TP53INP1Q96A56 240 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 PHF12Q96QT6 1004 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 GSTO2Q9H4Y5 243 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 IL1RL2Q9HB29 575 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 CNIH4Q9P003 139 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 MCM8Q9UJA3 840 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 KLF2Q9Y5W3 355 aaPredicted RBP15.9■□□□□ 0.14
PHRF1-204ENST00000532550 ZNF780BQ9Y6R6 833 aa15.9■□□□□ 0.14
PHRF1-204ENST00000532550 A0A0G2JMM0 328 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 A0A1W2PPB8 328 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 GNG14A0A1W2PPG7 69 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 A0A1W2PRS3 328 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 TLDC2A0PJX2 215 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 KIR3DP1A8MWS1 328 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 E9PLN8 166 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 CDH16O75309 829 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 PROCP04070 461 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 CLPSP04118 112 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 FBXO45P0C2W1 286 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 CHN1P15882 459 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 KRT4P19013 534 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 AGAP20933 346 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 PIGAP37287 484 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 NR0B1P51843 470 aaKnown RBP15.89■□□□□ 0.13
PHRF1-204ENST00000532550 ADORA2A-AS1P86434 159 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 BTKQ06187 659 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 ACSM2AQ08AH3 577 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 SPIN4Q56A73 249 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 CFAP157Q5JU67 520 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 ACSM2BQ68CK6 577 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 LYPD8Q6UX82 237 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 EPS8L3Q8TE67 593 aaKnown RBP15.89■□□□□ 0.13
PHRF1-204ENST00000532550 PAQR8Q8TEZ7 354 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 KLHL29Q96CT2 875 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 VKORC1Q9BQB6 163 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 ACPTQ9BZG2 426 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 BRINP2Q9C0B6 783 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 ZDHHC11Q9H8X9 412 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 PLSCR2Q9NRY7 297 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 ENTPD4Q9Y227 616 aa15.89■□□□□ 0.13
PHRF1-204ENST00000532550 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.89■□□□□ 0.13
PHRF1-204ENST00000532550 H3BQF6 201 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 TP53I11O14683 189 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 PLIN3O60664 434 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 CRCPO75575 148 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 GLSO94925 669 aaPredicted RBP15.88■□□□□ 0.13
PHRF1-204ENST00000532550 DRD2P14416 443 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 CPA3P15088 417 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 HTR6P50406 440 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms