RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 EHD3Q9NZN3 535 aa12.93□□□□□ -0.34
TSPAN4-220ENST00000532375 GIMAP2Q9UG22 337 aa12.93□□□□□ -0.34
TSPAN4-220ENST00000532375 ERVK-19Q9WJR5 959 aa12.93□□□□□ -0.34
TSPAN4-220ENST00000532375 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.93□□□□□ -0.34
TSPAN4-220ENST00000532375 RAP2CQ9Y3L5 183 aa12.93□□□□□ -0.34
TSPAN4-220ENST00000532375 ESPL1Q14674 2120 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 OR10H2O60403 315 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 PRAMEF2O60811 474 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 SNNO75324 88 aaPredicted RBP12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 ERAL1O75616 437 aaKnown RBP12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 OR2J2O76002 312 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 NADKO95544 446 aaPredicted RBP12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 NEFHP12036 1026 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 SDC1P18827 310 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 DDCP20711 480 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 SSTR4P31391 388 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 PTGER1P34995 402 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 SLC1A6P48664 564 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 ALDH9A1P49189 494 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 STX3Q13277 289 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 HEPACAMQ14CZ8 416 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 OR1C1Q15619 314 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 HHATQ5VTY9 493 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 ZNF324BQ6AW86 544 aaPredicted RBP12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 HDXQ7Z353 690 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 ZNF441Q8N8Z8 693 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 NUBPLQ8TB37 319 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 KLHL29Q96CT2 875 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 ATP6V1G3Q96LB4 118 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 RASL10BQ96S79 203 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.92□□□□□ -0.343e-7■■■■■ 28.3
TSPAN4-220ENST00000532375 SLC35C2Q9NQQ7 365 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 LRFN1Q9P244 771 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 UTS2RQ9UKP6 389 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 PSME2Q9UL46 239 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 YARS2Q9Y2Z4 477 aaKnown RBP12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 POLEQ07864 2286 aa12.92□□□□□ -0.34
TSPAN4-220ENST00000532375 ATP6AP2A0A1C7CYW4 349 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 GOLGA6L10A6NI86 522 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 MYO1GB0I1T2 1018 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 WWP2O00308 870 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 ATP6AP2O75787 350 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 WISP2O76076 250 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 HSPA4LO95757 839 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 CBX7O95931 251 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 CHEK2O96017 543 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 EBPQ15125 230 aaKnown RBP12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 NR6A1Q15406 480 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 LTB4RQ15722 352 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 MPEG1Q2M385 716 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 ZNF628Q5EBL2 1059 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 PIGGQ5H8A4 983 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 ZNF766Q5HY98 468 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 C6orf136Q5SQH8 315 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 TICAM1Q8IUC6 712 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 GALNT12Q8IXK2 581 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 DDIASQ8IXT1 998 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 CCDC116Q8IYX3 515 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 MGARPQ8TDB4 240 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 GRHL3Q8TE85 626 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 ADIPOR1Q96A54 375 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 ART5Q96L15 291 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 CCT7Q99832 543 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 CNPPD1Q9BV87 410 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 PNPOQ9NVS9 261 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 MAP10Q9P2G4 905 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 BAIAP2L1Q9UHR4 511 aa12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 COPG1Q9Y678 874 aaKnown RBP12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 NUP214P35658 2090 aaPredicted RBP12.91□□□□□ -0.34
TSPAN4-220ENST00000532375 TENM4Q6N022 2769 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 FCHO1O14526 889 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 TBX19O60806 448 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 PEX11AO75192 247 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 OR6B1O95007 311 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 SNUPNO95149 360 aaKnown RBP12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 WISP1O95388 367 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 UQCRHP07919 91 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 SP1P08047 785 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 BCKDHAP12694 445 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 NT5EP21589 574 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 SOX3P41225 446 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 CYB561P49447 251 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 RPL14P50914 215 aaKnown RBP12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 RPL38P63173 70 aaKnown RBP12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 PDE7AQ13946 482 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 TRMT12Q53H54 448 aaKnown RBP12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 ZNF385BQ569K4 471 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 SLC25A25Q6KCM7 469 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 RNF111Q6ZNA4 994 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 IKBIPQ70UQ0 350 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 MDGA2Q7Z553 956 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 LRRC25Q8N386 305 aaPredicted RBP12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 ADCY4Q8NFM4 1077 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 OR5L2Q8NGL0 311 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 PPP1R14CQ8TAE6 165 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 ZNF675Q8TD23 568 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 FAR1Q8WVX9 515 aa12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 EXOSC8Q96B26 276 aaKnown RBP12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 ZNF764Q96H86 408 aaPredicted RBP12.9□□□□□ -0.34
TSPAN4-220ENST00000532375 PAIP2Q9BPZ3 127 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms