RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 C9orf40Q8IXQ3 194 aa11.76□□□□□ -0.53
CCDC90B-216ENST00000529856 DDIASQ8IXT1 998 aa11.76□□□□□ -0.53
CCDC90B-216ENST00000529856 TMEM156Q8N614 296 aa11.76□□□□□ -0.53
CCDC90B-216ENST00000529856 NUBPLQ8TB37 319 aa11.76□□□□□ -0.53
CCDC90B-216ENST00000529856 SCMH1Q96GD3 660 aa11.76□□□□□ -0.53
CCDC90B-216ENST00000529856 FCRL1Q96LA6 429 aa11.76□□□□□ -0.53
CCDC90B-216ENST00000529856 PAIP2Q9BPZ3 127 aaKnown RBP11.76□□□□□ -0.53
CCDC90B-216ENST00000529856 C20orf27Q9GZN8 174 aa11.76□□□□□ -0.53
CCDC90B-216ENST00000529856 ZNF395Q9H8N7 513 aaPredicted RBP11.76□□□□□ -0.53
CCDC90B-216ENST00000529856 MYNNQ9NPC7 610 aa11.76□□□□□ -0.53
CCDC90B-216ENST00000529856 ARGLU1Q9NWB6 273 aaPredicted RBP11.76□□□□□ -0.53
CCDC90B-216ENST00000529856 EHD3Q9NZN3 535 aa11.76□□□□□ -0.53
CCDC90B-216ENST00000529856 MAP10Q9P2G4 905 aa11.76□□□□□ -0.53
CCDC90B-216ENST00000529856 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.76□□□□□ -0.53
CCDC90B-216ENST00000529856 ZNF780BQ9Y6R6 833 aa11.76□□□□□ -0.53
CCDC90B-216ENST00000529856 OR6C76A6NM76 312 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 VPS4BO75351 444 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 CD46P15529 392 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 DDCP20711 480 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 S1PR1P21453 382 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 SSTR4P31391 388 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 SLC1A6P48664 564 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 SLC37A1P57057 533 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 DUSP2Q05923 314 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 MGAT2Q10469 447 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 MAP4K2Q12851 820 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 STX3Q13277 289 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 MPEG1Q2M385 716 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 PRICKLE4Q2TBC4 344 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 XKR7Q5GH72 579 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 PIGGQ5H8A4 983 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 SLC25A25Q6KCM7 469 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 FAM180BQ6P0A1 224 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 IKBIPQ70UQ0 350 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 ATCAYQ86WG3 371 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 CCDC116Q8IYX3 515 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 SAMD14Q8IZD0 417 aaPredicted RBP11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 ZNF615Q8N8J6 731 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 GALNT11Q8NCW6 608 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 OR7G1Q8NGA0 311 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 GRHL3Q8TE85 626 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 ARL8AQ96BM9 186 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 EGLN2Q96KS0 407 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 C3orf30Q96M34 536 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 C5orf34Q96MH7 638 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 TAAR6Q96RI8 345 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 RASL10BQ96S79 203 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 CCT7Q99832 543 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 PLSCR2Q9NRY7 297 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 TAS2R7Q9NYW3 318 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 VPS4AQ9UN37 437 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 EXO1Q9UQ84 846 aaKnown RBP11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 TMED5Q9Y3A6 229 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 RAP2CQ9Y3L5 183 aa11.75□□□□□ -0.53
CCDC90B-216ENST00000529856 HELZ2Q9BYK8 2649 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 NBASA2RRP1 2371 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 TCP11X1B4DZS4 312 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 ZNF354AO60765 605 aaPredicted RBP11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 SLC25A12O75746 678 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 RASAL1O95294 804 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 TACR1P25103 407 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 SOX18P35713 384 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 KCNC4Q03721 635 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 CEBPEQ15744 281 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 PRSS53Q2L4Q9 553 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 GALNTL6Q49A17 601 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 C6orf163Q5TEZ5 329 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 FAM111BQ6SJ93 734 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 SLC29A4Q7RTT9 530 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 GPALPP1Q8IXQ4 340 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 LRRC25Q8N386 305 aaPredicted RBP11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 BCORP1Q8N888 145 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 ZNF781Q8N8C0 355 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 TMEM178AQ8NBL3 297 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 DNAJB8Q8NHS0 232 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 CDC26Q8NHZ8 85 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 MGARPQ8TDB4 240 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 FAR1Q8WVX9 515 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 ASB15Q8WXK1 588 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 EXOSC8Q96B26 276 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 CTHRC1Q96CG8 243 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 PPP3R2Q96LZ3 170 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 SORT1Q99523 831 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 HES7Q9BYE0 225 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 OR10A5Q9H207 317 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 VIPAS39Q9H9C1 493 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 PFDN4Q9NQP4 134 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 SLC35C2Q9NQQ7 365 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 KLHL1Q9NR64 748 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 AGPAT4Q9NRZ5 378 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 NKIRAS1Q9NYS0 192 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 MAT2BQ9NZL9 334 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 ZNF639Q9UID6 485 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 HAO1Q9UJM8 370 aa11.74□□□□□ -0.53
CCDC90B-216ENST00000529856 GCN1Q92616 2671 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 A8MVJ9 347 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 MYO1GB0I1T2 1018 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 PEX11AO75192 247 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 SKAP2O75563 359 aaPredicted RBP11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 OR6B1O95007 311 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms