RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 NT5EP21589 574 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 SOAT1P35610 550 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 MC3RP41968 323 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 MTPNP58546 118 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 ASRGL1Q7L266 308 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 ST13P4Q8IZP2 240 aaPredicted RBP23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 NLGN4XQ8N0W4 816 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 ENDOVQ8N8Q3 282 aaKnown RBP23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 NLGN4YQ8NFZ3 816 aaPredicted RBP23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 PSMA8Q8TAA3 256 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 CT55Q8WUE5 264 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 ANKRD27Q96NW4 1050 aa23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 PNO1Q9NRX1 252 aaKnown RBP23.13■■□□□ 1.29
LDLRAD3-203ENST00000528989 HRKO00198 91 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 NPPAP01160 153 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 RASSF2P50749 326 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 LRRC74AQ0VAA2 488 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 MGAT2Q10469 447 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 PRICKLE4Q2TBC4 344 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 RUNDC3AQ59EK9 446 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 CPZQ66K79 652 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 PGAM4Q8N0Y7 254 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 PLPP5Q8NEB5 264 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 OR7G2Q8NG99 324 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 ZFP28Q8NHY6 868 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 ELP4Q96EB1 424 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 DGAT2Q96PD7 388 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 PHF12Q96QT6 1004 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 SLC35A5Q9BS91 424 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 LRMDAQ9H2I8 198 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 WDR54Q9H977 334 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 VPS4AQ9UN37 437 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 AK5Q9Y6K8 562 aa23.12■■□□□ 1.29
LDLRAD3-203ENST00000528989 IGHV3-20A0A0C4DH32 117 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 TCRBV16S1A1N1A0A5B0 115 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 STMND1H3BQB6 276 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 HNRNPCL1O60812 293 aaKnown RBP23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 F8A1P23610 371 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 EMP2P54851 167 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 RPS18P62269 152 aaKnown RBP23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 ZNF628Q5EBL2 1059 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 C10orf111Q8N326 155 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 ESX1Q8N693 406 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 RIT1Q92963 219 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 CLPTM1LQ96KA5 538 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 CDRT15Q96T59 188 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 CRB3Q9BUF7 120 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 CADM1Q9BY67 442 aaKnown RBP23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 B3GNT4Q9C0J1 378 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 NRSN2Q9GZP1 204 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 NEUROD4Q9HD90 331 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 GMPR2Q9P2T1 348 aaKnown RBP23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 PTRH2Q9Y3E5 179 aaKnown RBP23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 TRABD2BA6NFA1 517 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 BRINP1O60477 761 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 STT3AP46977 705 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 CCT3P49368 545 aaKnown RBP23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 SLC7A2P52569 658 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 PRKAG1P54619 331 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 SERTAD2Q14140 314 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 C16orf89Q6UX73 402 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 SZRD1Q7Z422 152 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 SLC15A3Q8IY34 581 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 RNF148Q8N7C7 305 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 ZFP90Q8TF47 636 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 FAM120BQ96EK7 910 aaKnown RBP23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 HOPXQ9BPY8 73 aaPredicted RBP23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 CXorf21Q9HAI6 301 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 TPT1P8Q9HAU6 139 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 GPATCH2Q9NW75 528 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 CMTM6Q9NX76 183 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 MAT2BQ9NZL9 334 aa23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.11■■□□□ 1.29
LDLRAD3-203ENST00000528989 CLIC1O00299 241 aa23.1■■□□□ 1.29
LDLRAD3-203ENST00000528989 UPK1AO00322 258 aa23.1■■□□□ 1.29
LDLRAD3-203ENST00000528989 GSC2O15499 205 aa23.1■■□□□ 1.29
LDLRAD3-203ENST00000528989 RAD1O60671 282 aa23.1■■□□□ 1.29
LDLRAD3-203ENST00000528989 UMODP07911 640 aa23.1■■□□□ 1.29
LDLRAD3-203ENST00000528989 ZCCHC18P0CG32 403 aa23.1■■□□□ 1.29
LDLRAD3-203ENST00000528989 PLA2G5P39877 138 aa23.1■■□□□ 1.29
LDLRAD3-203ENST00000528989 PUM1Q14671 1186 aaKnown RBP eCLIP23.1■■□□□ 1.29
LDLRAD3-203ENST00000528989 TGIF1Q15583 401 aa23.1■■□□□ 1.29
LDLRAD3-203ENST00000528989 DNAJB8Q8NHS0 232 aa23.1■■□□□ 1.29
LDLRAD3-203ENST00000528989 PTPMT1Q8WUK0 201 aaPredicted RBP23.1■■□□□ 1.29
LDLRAD3-203ENST00000528989 THTPAQ9BU02 230 aa23.1■■□□□ 1.29
LDLRAD3-203ENST00000528989 ALOX12BO75342 701 aa23.09■■□□□ 1.29
LDLRAD3-203ENST00000528989 SORBS2O94875 1100 aaKnown RBP23.09■■□□□ 1.29
LDLRAD3-203ENST00000528989 UQCRC2P22695 453 aa23.09■■□□□ 1.29
LDLRAD3-203ENST00000528989 PGDP52209 483 aa23.09■■□□□ 1.29
LDLRAD3-203ENST00000528989 SPDYE7PQ495Y7 208 aa23.09■■□□□ 1.29
LDLRAD3-203ENST00000528989 TMEM125Q96AQ2 219 aa23.09■■□□□ 1.29
LDLRAD3-203ENST00000528989 C8orf44Q96CB5 159 aa23.09■■□□□ 1.29
LDLRAD3-203ENST00000528989 THUMPD3Q9BV44 507 aaKnown RBP23.09■■□□□ 1.29
LDLRAD3-203ENST00000528989 SCNM1Q9BWG6 230 aa23.09■■□□□ 1.29
LDLRAD3-203ENST00000528989 PIF1Q9H611 641 aa23.09■■□□□ 1.29
LDLRAD3-203ENST00000528989 ADA2Q9NZK5 511 aa23.09■■□□□ 1.29
LDLRAD3-203ENST00000528989 WASF3Q9UPY6 502 aa23.09■■□□□ 1.29
LDLRAD3-203ENST00000528989 RNF103-CHMP3A0A140T963 221 aa23.09■■□□□ 1.29
LDLRAD3-203ENST00000528989 LOC101059948A0A1B0GTJ6 334 aa23.09■■□□□ 1.29
LDLRAD3-203ENST00000528989 TNNI3P19429 210 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms