RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 KLF13Q9Y2Y9 288 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-215ENST00000528396 POLR3HQ9Y535 204 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-215ENST00000528396 C2orf92A0A1B0GVN3 265 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 KLRC4-KLRK1H3BQV0 150 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 HRKO00198 91 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 BIRC5O15392 142 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 NME2P1O60361 137 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 IGKV3-11P04433 115 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 SERPINE1P05121 402 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 EDN3P14138 238 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 NME2P22392 152 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 SOX3P41225 446 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 PMP22Q01453 160 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 MRPL49Q13405 166 aaKnown RBP12.41□□□□□ -0.42
CAPN1-215ENST00000528396 CHI3L2Q15782 390 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 ZNF750Q32MQ0 723 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 GALNTL6Q49A17 601 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 BEND6Q5SZJ8 279 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-215ENST00000528396 FHL5Q5TD97 284 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 NOXRED1Q6NXP6 359 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-215ENST00000528396 C9orf40Q8IXQ3 194 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 TAGAPQ8N103 731 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 VWA5B2Q8N398 1253 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 ANKRD42Q8N9B4 389 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 ST6GALNAC3Q8NDV1 305 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 NUBPLQ8TB37 319 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 TWIST2Q8WVJ9 160 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 NR4A3Q92570 626 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 SCMH1Q96GD3 660 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 METTL2AQ96IZ6 378 aaKnown RBP12.41□□□□□ -0.42
CAPN1-215ENST00000528396 TAAR6Q96RI8 345 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 RASL10BQ96S79 203 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 TRIM45Q9H8W5 580 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-215ENST00000528396 SIRT5Q9NXA8 310 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 NKIRAS1Q9NYS0 192 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 BCAP29Q9UHQ4 241 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 CES1P1Q9UKY3 287 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 WBP11Q9Y2W2 641 aaKnown RBP12.41□□□□□ -0.42
CAPN1-215ENST00000528396 DNAJC15Q9Y5T4 150 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 PTGDR2Q9Y5Y4 395 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 ESPL1Q14674 2120 aa12.41□□□□□ -0.42
CAPN1-215ENST00000528396 SHANK1Q9Y566 2161 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 A0A1W2PS29 197 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 TMEM233B4DJY2 109 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 PIP5K1BO14986 540 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 OR6B1O95007 311 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 AGFG2O95081 481 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 CBX6O95503 412 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 ATP1B1P05026 303 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 FGF4P08620 206 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 MAPK1P28482 360 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 SSTR4P31391 388 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 MPIP34949 423 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 ETV4P43268 484 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 NRG3P56975 720 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 SLC37A1P57057 533 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 RPL38P63173 70 aaKnown RBP12.4□□□□□ -0.42
CAPN1-215ENST00000528396 ALDH6A1Q02252 535 aaKnown RBP12.4□□□□□ -0.42
CAPN1-215ENST00000528396 MPEG1Q2M385 716 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 EIF2S3LQ2VIR3 472 aaKnown RBP12.4□□□□□ -0.42
CAPN1-215ENST00000528396 GFRALQ6UXV0 394 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 RTL4Q6ZR62 310 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 IKBIPQ70UQ0 350 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 GOLGA6L1Q8N7Z2 621 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 OR7G1Q8NGA0 311 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 BARD1Q99728 777 aaKnown RBP12.4□□□□□ -0.42
CAPN1-215ENST00000528396 CCT7Q99832 543 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 WWTR1Q9GZV5 400 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 OR10A5Q9H207 317 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 MYNNQ9NPC7 610 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 SLC35C2Q9NQQ7 365 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 EHD3Q9NZN3 535 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 HEY2Q9UBP5 337 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 SEC14L3Q9UDX4 400 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 CFL2Q9Y281 166 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 TMED5Q9Y3A6 229 aa12.4□□□□□ -0.42
CAPN1-215ENST00000528396 USP9XQ93008 2570 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-215ENST00000528396 TMEM200CA6NKL6 621 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 CAPN14A8MX76 684 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 TMEM114B3SHH9 223 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 PEX1O43933 1283 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 SKAP2O75563 359 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-215ENST00000528396 SNUPNO95149 360 aaKnown RBP12.39□□□□□ -0.43
CAPN1-215ENST00000528396 P04436 131 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 ZNF24P17028 368 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 DDCP20711 480 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 PRPH2P23942 346 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 GRK2P25098 689 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 NTSP30990 170 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 MEOX1P50221 254 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 RBPJQ06330 500 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 CASP8Q14790 479 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 PIGGQ5H8A4 983 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 FAM180BQ6P0A1 224 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 TICAM1Q8IUC6 712 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 CCDC116Q8IYX3 515 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 DND1Q8IYX4 353 aaKnown RBP12.39□□□□□ -0.43
CAPN1-215ENST00000528396 KIRREL3Q8IZU9 778 aa12.39□□□□□ -0.43
CAPN1-215ENST00000528396 FAM26EQ8N5C1 309 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms