RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 SPACA9Q96E40 222 aaPredicted RBP19.06■□□□□ 0.64
VPS28-206ENST00000526734 GAL3ST4Q96RP7 486 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 OXSMQ9NWU1 459 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 CFL2Q9Y281 166 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 ICE1Q9Y2F5 2266 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 CAPN14A8MX76 684 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 PCDH7O60245 1069 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 ZG16O60844 167 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 CRCPO75575 148 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 NADKO95544 446 aaPredicted RBP19.05■□□□□ 0.64
VPS28-206ENST00000526734 CLDN1O95832 211 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 FBXO45P0C2W1 286 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 NT5EP21589 574 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 TMED10P49755 219 aaKnown RBP19.05■□□□□ 0.64
VPS28-206ENST00000526734 HTR6P50406 440 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 GPR85P60893 370 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 PLGLB1Q02325 96 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 LIPMQ5VYY2 423 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 SLC22A16Q86VW1 577 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 VWA5B2Q8N398 1253 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 PAQR8Q8TEZ7 354 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 AENQ8WTP8 325 aaKnown RBP19.05■□□□□ 0.64
VPS28-206ENST00000526734 CAVIN3Q969G5 261 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 KLHL29Q96CT2 875 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 APOPT1Q96IL0 206 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 TRMOQ9BU70 441 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 PLSCR2Q9NRY7 297 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 DEPPQ9NTK1 212 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 CNIH4Q9P003 139 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 LGALS13Q9UHV8 139 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 ZNF780BQ9Y6R6 833 aa19.05■□□□□ 0.64
VPS28-206ENST00000526734 C2orf92A0A1B0GVN3 265 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 GNG14A0A1W2PPG7 69 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 TLDC2A0PJX2 215 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 PRRG2O14669 202 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 CLPSP04118 112 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 TIA1P31483 386 aaKnown RBP eCLIP19.04■□□□□ 0.64
VPS28-206ENST00000526734 MAP4K2Q12851 820 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 HEPACAMQ14CZ8 416 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 C3AR1Q16581 482 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 ZNF750Q32MQ0 723 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 CMPK2Q5EBM0 449 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 SLC22A10Q63ZE4 541 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 ARHGAP11AQ6P4F7 1023 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 FAM47EQ6ZV65 393 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 C4orf33Q8N1A6 199 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 LRRC25Q8N386 305 aaPredicted RBP19.04■□□□□ 0.64
VPS28-206ENST00000526734 ZNF808Q8N4W9 903 aaPredicted RBP19.04■□□□□ 0.64
VPS28-206ENST00000526734 ZNF441Q8N8Z8 693 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 FAM76AQ8TAV0 307 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 UCN3Q969E3 161 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 METTL2AQ96IZ6 378 aaKnown RBP19.04■□□□□ 0.64
VPS28-206ENST00000526734 IL1RL2Q9HB29 575 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 EHD3Q9NZN3 535 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 TIMM22Q9Y584 194 aa19.04■□□□□ 0.64
VPS28-206ENST00000526734 FOXO6A8MYZ6 492 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 UBFD1O14562 309 aaKnown RBP19.03■□□□□ 0.64
VPS28-206ENST00000526734 HS6ST1O60243 411 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 ZNF354AO60765 605 aaPredicted RBP19.03■□□□□ 0.64
VPS28-206ENST00000526734 ERAL1O75616 437 aaKnown RBP19.03■□□□□ 0.64
VPS28-206ENST00000526734 WISP2O76076 250 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 ESRRAP11474 423 aaPredicted RBP19.03■□□□□ 0.64
VPS28-206ENST00000526734 CHN1P15882 459 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 SSTR4P31391 388 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 ALDH9A1P49189 494 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 NRG3P56975 720 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 PPIAP62937 165 aaKnown RBP19.03■□□□□ 0.64
VPS28-206ENST00000526734 IMPG1Q17R60 797 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 HYAL4Q2M3T9 481 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 TBCELQ5QJ74 424 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 LYPD8Q6UX82 237 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 TRIM46Q7Z4K8 759 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 TRABD2AQ86V40 505 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 FBXW8Q8N3Y1 598 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 ZNF615Q8N8J6 731 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 SREK1Q8WXA9 508 aaKnown RBP19.03■□□□□ 0.64
VPS28-206ENST00000526734 ERP27Q96DN0 273 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 C11orf24Q96F05 449 aaPredicted RBP19.03■□□□□ 0.64
VPS28-206ENST00000526734 CCDC120Q96HB5 630 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 OR10A5Q9H207 317 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 ZDHHC11Q9H8X9 412 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 SH2D2AQ9NP31 389 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 RRAGDQ9NQL2 400 aaPredicted RBP19.03■□□□□ 0.64
VPS28-206ENST00000526734 GIMAP4Q9NUV9 329 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 DLGAP4Q9Y2H0 992 aa19.03■□□□□ 0.64
VPS28-206ENST00000526734 WBP11Q9Y2W2 641 aaKnown RBP19.03■□□□□ 0.64
VPS28-206ENST00000526734 A0A1W2PS29 197 aa19.02■□□□□ 0.64
VPS28-206ENST00000526734 RSL1D1O76021 490 aaKnown RBP19.02■□□□□ 0.64
VPS28-206ENST00000526734 GLSO94925 669 aaPredicted RBP19.02■□□□□ 0.64
VPS28-206ENST00000526734 CCL3P10147 92 aa19.02■□□□□ 0.64
VPS28-206ENST00000526734 UROSP10746 265 aa19.02■□□□□ 0.64
VPS28-206ENST00000526734 AGAP20933 346 aa19.02■□□□□ 0.64
VPS28-206ENST00000526734 PTGER1P34995 402 aa19.02■□□□□ 0.64
VPS28-206ENST00000526734 PTGS2P35354 604 aa19.02■□□□□ 0.64
VPS28-206ENST00000526734 RFC3P40938 356 aa19.02■□□□□ 0.64
VPS28-206ENST00000526734 SMSP52788 366 aa19.02■□□□□ 0.64
VPS28-206ENST00000526734 RPP38P78345 283 aaKnown RBP19.02■□□□□ 0.64
VPS28-206ENST00000526734 HMGCS1Q01581 520 aa19.02■□□□□ 0.64
VPS28-206ENST00000526734 ART3Q13508 389 aa19.02■□□□□ 0.64
VPS28-206ENST00000526734 NTRK2Q16620 822 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms