RNA–Protein interactions for RNA: ENST00000526308.2

PCDHB18P-202, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 3,197 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-202ENST00000526308 PPP3R1P63098 170 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 CRHR2Q13324 411 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 MAB21L1Q13394 359 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 PRSS53Q2L4Q9 553 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 CLEC12AQ5QGZ9 265 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 C12orf73Q69YU5 71 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 METTL3Q86U44 580 aaKnown RBP13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 PLCZ1Q86YW0 608 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 CFAP206Q8IYR0 622 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 TCTE3Q8IZS6 198 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 FAM109AQ8N4B1 249 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 GPR32P1Q8NGA4 272 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 DACT3Q96B18 629 aaPredicted RBP13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 EXOSC8Q96B26 276 aaKnown RBP13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 OMA1Q96E52 524 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 RNFT2Q96EX2 444 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 ZBED6CLQ96FA7 236 aaPredicted RBP13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 ZNF607Q96SK3 696 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 GDF15Q99988 308 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 MKRN2Q9H000 416 aaKnown RBP13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 KLHL21Q9UJP4 597 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 DIMT1Q9UNQ2 313 aaKnown RBP13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 SATB2Q9UPW6 733 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 CPEP16870 476 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 EPHB3P54753 998 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 ALDH6A1Q02252 535 aaKnown RBP13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 MPPE1Q53F39 396 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 KLHL22Q53GT1 634 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 WDR45BQ5MNZ6 344 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 FAM71E1Q6IPT2 247 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 SDE2Q6IQ49 451 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 ACSM5Q6NUN0 579 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 PODNL1Q6PEZ8 512 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 ZNF730Q6ZMV8 503 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 ASB18Q6ZVZ8 466 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 OLIG3Q7RTU3 272 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 TRMT11Q7Z4G4 463 aaKnown RBP13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 OR56A3Q8NH54 315 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 TM9SF4Q92544 642 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 EFCAB11Q9BUY7 163 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 SMG9Q9H0W8 520 aaKnown RBP13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 MAT2BQ9NZL9 334 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 STOML2Q9UJZ1 356 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 DSPPQ9NZW4 1301 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 WASHC1A8K0Z3 465 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 C1GALT1C1LP0DN25 315 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 GJA1P17302 382 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 DDX5P17844 614 aaKnown RBP13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 SMIM11AP58511 58 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 FABP5Q01469 135 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 CSTF1Q05048 431 aaKnown RBP13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 PRKCZQ05513 592 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 PLK5Q496M5 336 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 MARCH9Q86YJ5 346 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 NPAS4Q8IUM7 802 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 TIGD4Q8IY51 512 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 RASGEF1AQ8N9B8 481 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 ADAMTS19Q8TE59 1207 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 ZNF582Q96NG8 517 aaPredicted RBP13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 WFDC6Q9BQY6 131 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 MYNNQ9NPC7 610 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 TAAR2Q9P1P5 351 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 KCND3Q9UK17 655 aa13.04□□□□□ -0.32
PCDHB18P-202ENST00000526308 KIAA0100Q14667 2235 aaKnown RBP13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 INMT-MINDY4F8WBC2 141 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 HCN1O60741 890 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 SEMA7AO75326 666 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 C1QBP02746 253 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 EPHX1P07099 455 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 NR2F1P10589 423 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 CELP19835 753 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 GABRR2P28476 465 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 GIPRP48546 466 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 PRKAG1P54619 331 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 LSM11P83369 360 aaKnown RBP eCLIP13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 TMEM201Q5SNT2 666 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 GDPD4Q6W3E5 623 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 TRAPPC5Q8IUR0 188 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 SLC30A8Q8IWU4 369 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 OR4K5Q8NGD3 323 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 AUTS2Q8WXX7 1259 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 QRFPRQ96P65 431 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 SPNS1Q9H2V7 528 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 LGI1O95970 557 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 CH25HO95992 272 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 CYP2A6P11509 494 aaPredicted RBP13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 NPPBP16860 134 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 BUD31P41223 144 aaPredicted RBP13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 MAPK12P53778 367 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 CTBP2P56545 445 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 C6orf120Q7Z4R8 191 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 C11orf96Q7Z7L8 435 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 TMEM145Q8NBT3 493 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 UPRTQ96BW1 309 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 PDXPQ96GD0 296 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 ABCG4Q9H172 646 aa13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 ZNF334Q9HCZ1 680 aaPredicted RBP13.03□□□□□ -0.32
PCDHB18P-202ENST00000526308 C2orf92A0A1B0GVN3 265 aa13.02□□□□□ -0.32
PCDHB18P-202ENST00000526308 SNTNA6NMZ2 147 aa13.02□□□□□ -0.32
PCDHB18P-202ENST00000526308 ARSBP15848 533 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms