RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CCDC116Q8IYX3 515 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 LRRC25Q8N386 305 aaPredicted RBP12.04□□□□□ -0.48
SMPD1-202ENST00000526280 ZNF321PQ8N8H1 164 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 ACTRT2Q8TDY3 377 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 DOK4Q8TEW6 326 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 MTERF3Q96E29 417 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 FBXL20Q96IG2 436 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 ART5Q96L15 291 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 ZNF317Q96PQ6 595 aaPredicted RBP12.04□□□□□ -0.48
SMPD1-202ENST00000526280 LMF1Q96S06 567 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 ZBTB20Q9HC78 741 aaPredicted RBP12.04□□□□□ -0.48
SMPD1-202ENST00000526280 ZNF71Q9NQZ8 489 aaPredicted RBP12.04□□□□□ -0.48
SMPD1-202ENST00000526280 GIMAP4Q9NUV9 329 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 ZNF223Q9UK11 482 aaPredicted RBP12.04□□□□□ -0.48
SMPD1-202ENST00000526280 ENTPD4Q9Y227 616 aa12.04□□□□□ -0.48
SMPD1-202ENST00000526280 BSNQ9UPA5 3926 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 TNRC6AQ8NDV7 1962 aaKnown RBP12.03□□□□□ -0.48
SMPD1-202ENST00000526280 GOLGA8QA0A0J9YX86 632 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 TRBV11-1A0A0K0K1C0 115 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 GOLGA8OA6NCC3 632 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 MYO1GB0I1T2 1018 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 GOLGA8NF8WBI6 632 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 HRKO00198 91 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 EDF1O60869 148 aaKnown RBP12.03□□□□□ -0.48
SMPD1-202ENST00000526280 CT62P0C5K7 136 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 PRPS1L1P21108 318 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 NT5EP21589 574 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 MPIP34949 423 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 CLDN8P56748 225 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 C21orf58P58505 322 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 MGAT2Q10469 447 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 FUT7Q11130 342 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 MAP4K2Q12851 820 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 MFAP5Q13361 173 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 PRICKLE4Q2TBC4 344 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 ACER2Q5QJU3 275 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 FCRLBQ6BAA4 426 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 ANKRD26P1Q6NSI1 321 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 IGFL3Q6UXB1 125 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 HSDL2Q6YN16 418 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 ASB18Q6ZVZ8 466 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 R3HCC1LQ7Z5L2 792 aaKnown RBP12.03□□□□□ -0.48
SMPD1-202ENST00000526280 SPATA19Q7Z5L4 167 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 HPS6Q86YV9 775 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 GALNT12Q8IXK2 581 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 RIMKLAQ8IXN7 391 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 ARMC10Q8N2F6 343 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 SLC5A8Q8N695 610 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 OR8K3Q8NH51 312 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 SUN3Q8TAQ9 357 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 SLC39A7Q92504 469 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 PPCDCQ96CD2 204 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 CTHRC1Q96CG8 243 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 BBS4Q96RK4 519 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 NPAS2Q99743 824 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 CNPPD1Q9BV87 410 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 DEFB126Q9BYW3 111 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 STMN3Q9NZ72 180 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 COPS7AQ9UBW8 275 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 ATP6V1HQ9UI12 483 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 TEKT2Q9UIF3 430 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 ERVK-19Q9WJR5 959 aa12.03□□□□□ -0.48
SMPD1-202ENST00000526280 SCAMP2O15127 329 aaKnown RBP12.02□□□□□ -0.49
SMPD1-202ENST00000526280 PRKNO60260 465 aaPredicted RBP12.02□□□□□ -0.49
SMPD1-202ENST00000526280 DIAPH2O60879 1101 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 ZFAND5O76080 213 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 CLPSP04118 112 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 ALDOCP09972 364 aaKnown RBP12.02□□□□□ -0.49
SMPD1-202ENST00000526280 PCSK2P16519 638 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 S1PR1P21453 382 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 SOX18P35713 384 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 HPCAL1P37235 193 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 RPL3P39023 403 aaKnown RBP12.02□□□□□ -0.49
SMPD1-202ENST00000526280 CORO7P57737 925 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 LTB4RQ15722 352 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 MEP1AQ16819 746 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 MPEG1Q2M385 716 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 ZNF385BQ569K4 471 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 ABHD17BQ5VST6 288 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 NXNQ6DKJ4 435 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 FAM111BQ6SJ93 734 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 LINC00696Q6ZRV3 163 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 RPS19BP1Q86WX3 136 aaKnown RBP12.02□□□□□ -0.49
SMPD1-202ENST00000526280 FAM9CQ8IZT9 166 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 LGI4Q8N135 537 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 KRTCAP2Q8N6L1 136 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 ADCY4Q8NFM4 1077 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 CEP70Q8NHQ1 597 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 ZNF675Q8TD23 568 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 ZNF354BQ96LW1 612 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 OR52B2Q96RD2 323 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 CDCP1Q9H5V8 836 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 MAT2BQ9NZL9 334 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 SH3BP4Q9P0V3 963 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 ZNF639Q9UID6 485 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 SPTA1P02549 2419 aa12.02□□□□□ -0.49
SMPD1-202ENST00000526280 TMEM200CA6NKL6 621 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 ANKRD28O15084 1053 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 PDPK1O15530 556 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 MAN1A2O60476 641 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms