RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 KCNAB2Q13303 367 aa19.33■□□□□ 0.68
CD44-222ENST00000526025 MLC1Q15049 377 aa19.33■□□□□ 0.68
CD44-222ENST00000526025 PRSS53Q2L4Q9 553 aa19.33■□□□□ 0.68
CD44-222ENST00000526025 PRICKLE4Q2TBC4 344 aa19.33■□□□□ 0.68
CD44-222ENST00000526025 ZNF750Q32MQ0 723 aa19.33■□□□□ 0.68
CD44-222ENST00000526025 PDCD4Q53EL6 469 aaKnown RBP19.33■□□□□ 0.68
CD44-222ENST00000526025 DGAT2L6Q6ZPD8 337 aa19.33■□□□□ 0.68
CD44-222ENST00000526025 FDCSPQ8NFU4 85 aa19.33■□□□□ 0.68
CD44-222ENST00000526025 OR7G1Q8NGA0 311 aa19.33■□□□□ 0.68
CD44-222ENST00000526025 ZBED6CLQ96FA7 236 aaPredicted RBP19.33■□□□□ 0.68
CD44-222ENST00000526025 UBL7Q96S82 380 aaPredicted RBP19.33■□□□□ 0.68
CD44-222ENST00000526025 EBF4Q9BQW3 602 aa19.33■□□□□ 0.68
CD44-222ENST00000526025 OR8D2Q9GZM6 311 aa19.33■□□□□ 0.68
CD44-222ENST00000526025 NPHS2Q9NP85 383 aa19.33■□□□□ 0.68
CD44-222ENST00000526025 SDR39U1Q9NRG7 319 aaPredicted RBP19.33■□□□□ 0.68
CD44-222ENST00000526025 MAT2BQ9NZL9 334 aa19.33■□□□□ 0.68
CD44-222ENST00000526025 ZNF639Q9UID6 485 aa19.33■□□□□ 0.68
CD44-222ENST00000526025 TEKT2Q9UIF3 430 aa19.33■□□□□ 0.68
CD44-222ENST00000526025 CNTRLQ7Z7A1 2325 aa19.33■□□□□ 0.68
CD44-222ENST00000526025 OR6C76A6NM76 312 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 PDPK1O15530 556 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 CELA2AP08217 269 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 SRSF11Q05519 484 aaKnown RBP19.32■□□□□ 0.68
CD44-222ENST00000526025 DUSP2Q05923 314 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 MGAT2Q10469 447 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 ZNF385BQ569K4 471 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 ZNF628Q5EBL2 1059 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 CPTPQ5TA50 214 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 AGAP7PQ5VUJ5 663 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 TCTN3Q6NUS6 607 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 CCDC116Q8IYX3 515 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 VWA5B2Q8N398 1253 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 SLC5A8Q8N695 610 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 KRTCAP2Q8N6L1 136 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 GLB1L3Q8NCI6 653 aaPredicted RBP19.32■□□□□ 0.68
CD44-222ENST00000526025 OR8J2Q8NGG1 315 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 ZFP28Q8NHY6 868 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 BRIX1Q8TDN6 353 aaKnown RBP19.32■□□□□ 0.68
CD44-222ENST00000526025 CHMP6Q96FZ7 201 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 AMDHD1Q96NU7 426 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 AGAP4Q96P64 663 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 BHLHE41Q9C0J9 482 aaPredicted RBP19.32■□□□□ 0.68
CD44-222ENST00000526025 ZNF552Q9H707 407 aaPredicted RBP19.32■□□□□ 0.68
CD44-222ENST00000526025 KCNK13Q9HB14 408 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 TMEM45AQ9NWC5 275 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 ZIM2Q9NZV7 527 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 SH3BP4Q9P0V3 963 aa19.32■□□□□ 0.68
CD44-222ENST00000526025 ZNF223Q9UK11 482 aaPredicted RBP19.32■□□□□ 0.68
CD44-222ENST00000526025 TLN1Q9Y490 2541 aaKnown RBP19.31■□□□□ 0.68
CD44-222ENST00000526025 ATMQ13315 3056 aa19.31■□□□□ 0.68
CD44-222ENST00000526025 PIEZO2Q9H5I5 2752 aa19.31■□□□□ 0.68
CD44-222ENST00000526025 A6NL46 340 aa19.31■□□□□ 0.68
CD44-222ENST00000526025 BCAS2O75934 225 aaPredicted RBP19.31■□□□□ 0.68
CD44-222ENST00000526025 PGDP52209 483 aa19.31■□□□□ 0.68
CD44-222ENST00000526025 ZNF267Q14586 743 aaPredicted RBP19.31■□□□□ 0.68
CD44-222ENST00000526025 MPEG1Q2M385 716 aa19.31■□□□□ 0.68
CD44-222ENST00000526025 IGFL2Q6UWQ7 119 aa19.31■□□□□ 0.68
CD44-222ENST00000526025 HSDL2Q6YN16 418 aa19.31■□□□□ 0.68
CD44-222ENST00000526025 OR7A2PQ8NGA2 310 aa19.31■□□□□ 0.68
CD44-222ENST00000526025 RFWD2Q8NHY2 731 aa19.31■□□□□ 0.68
CD44-222ENST00000526025 LMF1Q96S06 567 aa19.31■□□□□ 0.68
CD44-222ENST00000526025 NUDT9Q9BW91 350 aa19.31■□□□□ 0.68
CD44-222ENST00000526025 DEFB126Q9BYW3 111 aa19.31■□□□□ 0.68
CD44-222ENST00000526025 CLMPQ9H6B4 373 aa19.31■□□□□ 0.68
CD44-222ENST00000526025 SLAMF7Q9NQ25 335 aa19.31■□□□□ 0.68
CD44-222ENST00000526025 DCTN4Q9UJW0 460 aa19.31■□□□□ 0.68
CD44-222ENST00000526025 ERVK-19Q9WJR5 959 aa19.31■□□□□ 0.68
CD44-222ENST00000526025 TNRC6AQ8NDV7 1962 aaKnown RBP19.3■□□□□ 0.68
CD44-222ENST00000526025 NUP214P35658 2090 aaPredicted RBP19.3■□□□□ 0.68
CD44-222ENST00000526025 A0A087WV62 115 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 TRBV11-1A0A0K0K1C0 115 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 PLOD2O00469 737 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 PLOD3O60568 738 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 ZFAND5O76080 213 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 S1PR1P21453 382 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 ATP4BP51164 291 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 NCBP2P52298 156 aaKnown RBP eCLIP19.3■□□□□ 0.68
CD44-222ENST00000526025 SLC37A1P57057 533 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 RPS6KA2Q15349 733 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 METTL21CQ5VZV1 264 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 TMEM198Q66K66 360 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 ANKRD26P1Q6NSI1 321 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 CGB2Q6NT52 195 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 FAM180BQ6P0A1 224 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 IGFL3Q6UXB1 125 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 ISLR2Q6UXK2 745 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 RNF111Q6ZNA4 994 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 OR5L2Q8NGL0 311 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 OR9A2Q8NGT5 310 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 NUBPLQ8TB37 319 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 ABHD17AQ96GS6 310 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 ZNF354BQ96LW1 612 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 CNPPD1Q9BV87 410 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 GLIPR2Q9H4G4 154 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 KLHL14Q9P2G3 628 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 TRIM33Q9UPN9 1127 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 CFL2Q9Y281 166 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 ZNF451Q9Y4E5 1061 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 NBEAQ8NFP9 2946 aa19.3■□□□□ 0.68
CD44-222ENST00000526025 IGSF10Q6WRI0 2623 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms