RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 H2AFXP16104 143 aaPredicted RBP12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 PTX3P26022 381 aaPredicted RBP12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 HSD17B3P37058 310 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 ZFP36L2P47974 494 aaKnown RBP12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 ALDH18A1P54886 795 aaKnown RBP12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 HERVK_113P63132 956 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 ERVK-8P63133 956 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 TBL3Q12788 808 aaKnown RBP12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 NTRK2Q16620 822 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 PFKFB4Q16877 469 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 BEND6Q5SZJ8 279 aaPredicted RBP12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 SEM1Q6ZVN7 128 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 DND1Q8IYX4 353 aaKnown RBP12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 MREGQ8N565 214 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 OR10G3Q8NGC4 313 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 DOK4Q8TEW6 326 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 UCN3Q969E3 161 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 SARAFQ96BY9 339 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 NTNG2Q96CW9 530 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 ERVK-6Q9BXR3 956 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 ACKR4Q9NPB9 350 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 SNX15Q9NRS6 342 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 LYARQ9NX58 379 aaKnown RBP12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 QPCTLQ9NXS2 382 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 CNIH4Q9P003 139 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 ACAD8Q9UKU7 415 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 ERVK-19Q9WJR5 959 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 L3MBTL1Q9Y468 752 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 PRRC2AP48634 2157 aaKnown RBP12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 KIAA1549Q9HCM3 1950 aa12.94□□□□□ -0.34
HMBOX1-209ENST00000522468 A0A087X1B8 175 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 A0A1W2PS29 197 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 ANKRD33BA6NCL7 494 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 FOXE1O00358 373 aaPredicted RBP12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 TRIM3O75382 744 aaPredicted RBP12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 KLHL2O95198 593 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 AIFM1O95831 613 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 ALDOAP04075 364 aaKnown RBP12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 ABHD2P08910 425 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 SLC35E2P0CK97 266 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 TLX1P31314 330 aaPredicted RBP12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 BUD31P41223 144 aaPredicted RBP12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 RAP1GDS1P52306 607 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 ACAP2Q15057 778 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 UAP1Q16222 522 aaPredicted RBP12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 FAM83EQ2M2I3 478 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 C1orf185Q5T7R7 199 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 PRAMEF20Q5VT98 475 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 METTL2BQ6P1Q9 378 aaKnown RBP12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 RNF111Q6ZNA4 994 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 RIT1Q92963 219 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 PELOQ9BRX2 385 aaKnown RBP12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 CENPKQ9BS16 269 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 FUT8Q9BYC5 575 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 EPB41L4BQ9H329 900 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 ACTR8Q9H981 624 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 RNF11Q9Y3C5 154 aa12.93□□□□□ -0.34
HMBOX1-209ENST00000522468 GLOD5A6NK44 160 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 OR6C76A6NM76 312 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 OR7A17O14581 309 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 DYRK3O43781 588 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 SEMA3DO95025 777 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 SIX3O95343 332 aaPredicted RBP12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 FAM58BPP0C7Q3 252 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 NR2F6P10588 404 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 SERPINB3P29508 390 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 NEK2P51955 445 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 KCNJ2P63252 427 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 GTF2H2Q13888 395 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 ZNF267Q14586 743 aaPredicted RBP12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 CPSF6Q16630 551 aaKnown RBP eCLIP12.92□□□□□ -0.349e-7■■■□□ 18.3
HMBOX1-209ENST00000522468 SLC25A35Q3KQZ1 300 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 WLSQ5T9L3 541 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 RIPPLY2Q5TAB7 128 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 MROH9Q5TGP6 573 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 FNDC7Q5VTL7 733 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 GTF2H2CQ6P1K8 395 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 SLC29A4Q7RTT9 530 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 GOLGA7Q7Z5G4 137 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 NUDT13Q86X67 352 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 MYLK4Q86YV6 388 aaPredicted RBP12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 ULK2Q8IYT8 1036 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 CLYBLQ8N0X4 340 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 OR10Q1Q8NGQ4 319 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 NEIL3Q8TAT5 605 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 MED12Q93074 2177 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 GAL3ST4Q96RP7 486 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 ZNF559Q9BR84 538 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 SLC6A15Q9H2J7 730 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 UBQLN3Q9H347 655 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 ACSS3Q9H6R3 686 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 LDAHQ9H6V9 325 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 IPPKQ9H8X2 491 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 CXorf21Q9HAI6 301 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 SLC24A3Q9HC58 644 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 BOKQ9UMX3 212 aaPredicted RBP12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 IKBKGQ9Y6K9 419 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 DOCK7Q96N67 2140 aa12.92□□□□□ -0.34
HMBOX1-209ENST00000522468 ABCA4P78363 2273 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms