RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 TNPO3Q9Y5L0 923 aaKnown RBP13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ABCA4P78363 2273 aa13.42□□□□□ -0.26
SCARNA20.5-201ENST00000516991 AHRRA9YTQ3 701 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 FOXE1O00358 373 aaPredicted RBP13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 TMPRSS11DO60235 418 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 TRIM3O75382 744 aaPredicted RBP13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 EEDO75530 441 aaKnown RBP13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 PRKRAO75569 313 aaKnown RBP13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SNX4O95219 450 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 AIFM1O95831 613 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 BSGP35613 385 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 MAGEA4P43358 317 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 KIR2DL3P43628 341 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 PLTPP55058 493 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 NRG3P56975 720 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 PCBP2Q15366 365 aaKnown RBP eCLIP13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 PFKFB4Q16877 469 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 KRTAP21-3Q3LHN1 58 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ACSF3Q4G176 576 aaPredicted RBP13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 HLA-DQA1Q5Y7H0 255 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 TMEM198Q66K66 360 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 LACC1Q8IV20 430 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 CENPLQ8N0S6 344 aaPredicted RBP13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ZNF441Q8N8Z8 693 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 L3MBTL4Q8NA19 623 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 DIO2Q92813 273 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 HSPBAP1Q96EW2 488 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 POLDIP3Q9BY77 421 aaKnown RBP13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 CXXC4Q9H2H0 198 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 MTRF1LQ9UGC7 380 aaKnown RBP13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 FOXD3Q9UJU5 478 aaPredicted RBP13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 IKBKGQ9Y6K9 419 aa13.41□□□□□ -0.26
SCARNA20.5-201ENST00000516991 NF1P21359 2839 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 FREM3P0C091 2139 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 EXPH5Q8NEV8 1989 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 C15orf38-AP3S2A0A0A6YYH1 394 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 C2orf92A0A1B0GVN3 265 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 A0A1W2PR48 441 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SYT5O00445 386 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 CDH16O75309 829 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 C2P06681 752 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 PIK3R1P27986 724 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 TRPC1P48995 793 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 IST1P53990 364 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 CRYZQ08257 329 aaKnown RBP13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 DUSP8Q13202 625 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 GTF2H2Q13888 395 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ACAP2Q15057 778 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 CPSF6Q16630 551 aaKnown RBP eCLIP13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 FBXL19-AS1Q494R0 122 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 FLYWCH1Q4VC44 716 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 C10orf62Q5T681 223 aaPredicted RBP13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 GTF2H2CQ6P1K8 395 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 GOLGA7Q7Z5G4 137 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 GALNT12Q8IXK2 581 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 FBXO25Q8TCJ0 367 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 FAM222BQ8WU58 562 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 RNASE6Q93091 150 aaKnown RBP13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 RMND5BQ96G75 393 aaPredicted RBP13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SERPINI1Q99574 410 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 IPPKQ9H8X2 491 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 CXorf21Q9HAI6 301 aa13.4□□□□□ -0.26
SCARNA20.5-201ENST00000516991 PRRC2AP48634 2157 aaKnown RBP13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 GLOD5A6NK44 160 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 LRATO95237 230 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 EPPINO95925 133 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 CLPSP04118 112 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 CD99P14209 185 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 UQCRC1P31930 480 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 CEACAM8P31997 349 aaPredicted RBP13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 TIMP3P35625 211 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 MASP1P48740 699 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 SERPINB8P50452 374 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 CDK9P50750 372 aaKnown RBP13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 IRF9Q00978 393 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 C2orf54Q08AI8 447 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 SEM1Q6ZVN7 128 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 PACS2Q86VP3 889 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 RELL2Q8NC24 303 aaPredicted RBP13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 C17orf47Q8NEP4 570 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 OR7G1Q8NGA0 311 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 WDR20Q8TBZ3 569 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 SPPL2AQ8TCT8 520 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 DOK4Q8TEW6 326 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 NRGNQ92686 78 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 RILPQ96NA2 401 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 SH3GL2Q99962 352 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 GPATCH1Q9BRR8 931 aaKnown RBP13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 CLEC4MQ9H2X3 399 aaPredicted RBP13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 RASSF1Q9NS23 344 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 CPSF2Q9P2I0 782 aaKnown RBP13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 ZNF629Q9UEG4 869 aaPredicted RBP13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 ST6GALNAC2Q9UJ37 374 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 TMCO1Q9UM00 188 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 C15orf41Q9Y2V0 281 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 NPFFR2Q9Y5X5 522 aa13.39□□□□□ -0.27
SCARNA20.5-201ENST00000516991 KLHL2O95198 593 aa13.38□□□□□ -0.27
SCARNA20.5-201ENST00000516991 CLDN9O95484 217 aa13.38□□□□□ -0.27
SCARNA20.5-201ENST00000516991 IL2RAP01589 272 aa13.38□□□□□ -0.27
SCARNA20.5-201ENST00000516991 HPNP05981 417 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms