RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 PTGFRNQ9P2B2 879 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 TMEFF2Q9UIK5 374 aaPredicted RBP7.88□□□□□ -1.15
RNF4-220ENST00000513578 C3orf18Q9UK00 162 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 ABCG2Q9UNQ0 655 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 PLCL2Q9UPR0 1127 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 LIPT1Q9Y234 373 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 GPC6Q9Y625 555 aaPredicted RBP7.88□□□□□ -1.15
RNF4-220ENST00000513578 AK5Q9Y6K8 562 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 PI4KAP42356 2102 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 SCN2AQ99250 2005 aa7.88□□□□□ -1.15
RNF4-220ENST00000513578 GON4LQ3T8J9 2241 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 PRAMEF27A3QJZ7 478 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 FITM1A5D6W6 292 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 DPPA5A6NC42 116 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 ARRDC5A6NEK1 342 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 SLC9B1P1A6NJY1 282 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 E2F6O75461 281 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 PRKRAO75569 313 aaKnown RBP7.87□□□□□ -1.15
RNF4-220ENST00000513578 BMP10O95393 424 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 H6PDO95479 791 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 SNAP29O95721 258 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 GPR75O95800 540 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 ATP1B1P05026 303 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 GUSBP08236 651 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 MSL3P1P0C860 447 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 GIMD1P0DJR0 217 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 SMIM18P0DKX4 95 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 CPMP14384 443 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 PNLIPP16233 465 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 PORP16435 677 aaPredicted RBP7.87□□□□□ -1.15
RNF4-220ENST00000513578 RHCEP18577 417 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 PPP2R1BP30154 601 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 FEN1P39748 380 aaKnown RBP7.87□□□□□ -1.15
RNF4-220ENST00000513578 XCR1P46094 333 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 LIMS1P48059 325 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 KCNJ5P48544 419 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 CSNK1EP49674 416 aaKnown RBP7.87□□□□□ -1.15
RNF4-220ENST00000513578 XKP51811 444 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 CRISP3P54108 245 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 VSX2P58304 361 aaPredicted RBP7.87□□□□□ -1.15
RNF4-220ENST00000513578 PPP1CAP62136 330 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 TUBA4AP68366 448 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 SIGLEC14Q08ET2 396 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 DMWDQ09019 674 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 BIKQ13323 160 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 SQSTM1Q13501 440 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 TP53BP2Q13625 1128 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 ZNF628Q5EBL2 1059 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 OTUD3Q5T2D3 398 aaPredicted RBP7.87□□□□□ -1.15
RNF4-220ENST00000513578 PEAR1Q5VY43 1037 aaPredicted RBP7.87□□□□□ -1.15
RNF4-220ENST00000513578 KDM4DQ6B0I6 523 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 KRT80Q6KB66 452 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 HEPHL1Q6MZM0 1159 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 FAM180BQ6P0A1 224 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 FAHD1Q6P587 224 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 TNFAIP8L2Q6P589 184 aaPredicted RBP7.87□□□□□ -1.15
RNF4-220ENST00000513578 ZNF605Q86T29 641 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 OR2L13Q8N349 312 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 C7orf57Q8NEG2 295 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 NUP43Q8NFH3 380 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 OR4C15Q8NGM1 316 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 ZCCHC10Q8TBK6 192 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 ADAMTS16Q8TE57 1224 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 HOXB13Q92826 284 aaPredicted RBP7.87□□□□□ -1.15
RNF4-220ENST00000513578 PMM1Q92871 262 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 FKBP10Q96AY3 582 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 GIMAP5Q96F15 307 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 ZDHHC12Q96GR4 267 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 TPD52L3Q96J77 140 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 CCDC3Q9BQI4 270 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 ACTRT3Q9BYD9 372 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 FAM192AQ9GZU8 254 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 ANKHQ9HCJ1 492 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 FAM118AQ9NWS6 357 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 GIN1Q9NXP7 522 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 VNN3Q9NY84 501 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 NDUFAF4Q9P032 175 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 NDUFA13Q9P0J0 144 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 SUSD2Q9UGT4 822 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 MUTYHQ9UIF7 546 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 KCND3Q9UK17 655 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 MYRFQ9Y2G1 1151 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 MRPS2Q9Y399 296 aaKnown RBP7.87□□□□□ -1.15
RNF4-220ENST00000513578 NAALAD2Q9Y3Q0 740 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 ENPP4Q9Y6X5 453 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 HSPE1-MOB4S4R3N1 261 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 KNL1Q8NG31 2342 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 ADAMTS20P59510 1910 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 ARID1BQ8NFD5 2236 aaPredicted RBP7.87□□□□□ -1.15
RNF4-220ENST00000513578 NUP210LQ5VU65 1888 aa7.87□□□□□ -1.15
RNF4-220ENST00000513578 MN1Q10571 1320 aaPredicted RBP7.86□□□□□ -1.15
RNF4-220ENST00000513578 DSPPQ9NZW4 1301 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 PRAMEF25A6NGN4 478 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 GLOD5A6NK44 160 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 WASHC1A8K0Z3 465 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 RHPN2P1A8MT19 583 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 H0YIG0 161 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 hCG_2039718K7EN88 272 aa7.86□□□□□ -1.15
RNF4-220ENST00000513578 SYT5O00445 386 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms