RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	ADORA3	P0DMS8	318 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	SLC1A3	P43003	542 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	FKBP3	Q00688	224 aa	Known RBP	4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	PTK6	Q13882	451 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	GCKR	Q14397	625 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	ZNF146	Q15072	292 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	MAPK11	Q15759	364 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	CCL14	Q16627	93 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	KRTAP21-3	Q3LHN1	58 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	KRT71	Q3SY84	523 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	PARP10	Q53GL7	1025 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	ARMCX4	Q5H9R4	360 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	MPP7	Q5T2T1	576 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	TCEAL6	Q6IPX3	200 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	KLHL10	Q6JEL2	608 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	ANKRD46	Q86W74	232 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	DND1	Q8IYX4	353 aa	Known RBP	4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	SPPL2A	Q8TCT8	520 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	SGF29	Q96ES7	293 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	LURAP1	Q96LR2	239 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	KCNK13	Q9HB14	408 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	PTPRF	P10586	1907 aa		4.58	□□□□□ -1.68
LINC01088-208	ENST00000511895	SPG11	Q96JI7	2443 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	PTPRQ	Q9UMZ3	2332 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	PCNX3	Q9H6A9	2034 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	CELSR3	Q9NYQ7	3312 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	MAP3K15	Q6ZN16	1313 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895		A0A0B4J203	849 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	IGHV3-20	A0A0C4DH32	117 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	LOC730098	B7Z3J9	87 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	CXCL11	O14625	94 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	MBTPS2	O43462	519 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	PC	P11498	1178 aa	Known RBP	4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	SLC27A4	Q6P1M0	643 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	ZNF841	Q6ZN19	808 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895		Q6ZVQ6	151 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	SLC47A2	Q86VL8	602 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	SMYD1	Q8NB12	490 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	KIAA0895	Q8NCT3	520 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	C17orf47	Q8NEP4	570 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	CCDC114	Q96M63	670 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	ZNF577	Q9BSK1	485 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	UBAC1	Q9BSL1	405 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	UTP14A	Q9BVJ6	771 aa	Known RBP	4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	LSG1	Q9H089	658 aa	Known RBP	4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	CLMP	Q9H6B4	373 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	GTSE1	Q9NYZ3	720 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	MRPS18C	Q9Y3D5	142 aa	Known RBP	4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895		A0A1B0GUL6	1792 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	SIPA1L3	O60292	1781 aa	Predicted RBP	4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	DOPEY2	Q9Y3R5	2298 aa		4.57	□□□□□ -1.68
LINC01088-208	ENST00000511895	DNHD1	Q96M86	4753 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	C2orf92	A0A1B0GVN3	265 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895		A0A1W2PPR1	153 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	ACOD1	A6NK06	481 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895		J3QKU1	62 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	CTDSPL	O15194	276 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	INPP4B	O15327	924 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	ST8SIA3	O43173	380 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	SELE	P16581	610 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	EDNRA	P25101	427 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	PGF	P49763	221 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	RPP38	P78345	283 aa	Known RBP	4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	ZNF239	Q16600	458 aa	Known RBP	4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	UPP1	Q16831	310 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	FAM133B	Q5BKY9	247 aa	Known RBP	4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	ZRANB3	Q5FWF4	1079 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	MFSD14C	Q5VZR4	134 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	C17orf107	Q6ZR85	190 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	GALNTL5	Q7Z4T8	443 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	SLC25A42	Q86VD7	318 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	CATSPER3	Q86XQ3	398 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	CDC20B	Q86Y33	519 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	POM121L12	Q8N7R1	296 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	AMER3	Q8N944	861 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	SUMF1	Q8NBK3	374 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	UXS1	Q8NBZ7	420 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	ATF6B	Q99941	703 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	PUS3	Q9BZE2	481 aa	Known RBP	4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	HBS1L	Q9Y450	684 aa	Known RBP	4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	TLN1	Q9Y490	2541 aa	Known RBP	4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	MYO7A	Q13402	2215 aa		4.56	□□□□□ -1.68
LINC01088-208	ENST00000511895	TDRD15	B5MCY1	1934 aa	Known RBP	4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	ILVBL	A1L0T0	632 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	ZNF732	B4DXR9	585 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	RNF103	O00237	685 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	IFIT3	O14879	490 aa	Known RBP	4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	ZNF749	O43361	778 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	TNFSF12	O43508	249 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	SCO2	O43819	266 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	ACSL4	O60488	711 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	SLU7	O95391	586 aa	Known RBP	4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	ETV5	P41161	510 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	OR3A1	P47881	315 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	NDUFV3	P56181	108 aa	Known RBP	4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	RBP5	P82980	135 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	CNTN1	Q12860	1018 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms