RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 AIMP2Q13155 320 aaKnown RBP4.99□□□□□ -1.61
GYPB-212ENST00000511198 TNK1Q13470 666 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 TAF11Q15544 211 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 NFIL3Q16649 462 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 ANKRD20A2Q5SQ80 823 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 SEL1L2Q5TEA6 688 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 ANKRD20A1Q5TYW2 823 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 ANKRD20A3Q5VUR7 823 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 BSPRYQ5W0U4 402 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 AAGABQ6PD74 315 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 PPP1R21Q6ZMI0 780 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 CCDC25Q86WR0 208 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 UNC45BQ8IWX7 931 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 DSELQ8IZU8 1212 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 SFRP1Q8N474 314 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 MYCT1Q8N699 235 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 UBL4BQ8N7F7 174 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 ELP5Q8TE02 316 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 RNF139Q8WU17 664 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 DYDC1Q8WWB3 177 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 CKAP2Q8WWK9 683 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 CTNNBL1Q8WYA6 563 aaPredicted RBP4.99□□□□□ -1.61
GYPB-212ENST00000511198 SLCO2A1Q92959 643 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 THOC1Q96FV9 657 aaKnown RBP4.99□□□□□ -1.61
GYPB-212ENST00000511198 EEF2KMTQ96G04 330 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 GPR137Q96N19 417 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 IP6K3Q96PC2 410 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 TWNKQ96RR1 684 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 PIP5K1AQ99755 562 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 PRMT1Q99873 361 aaKnown RBP4.99□□□□□ -1.61
GYPB-212ENST00000511198 TRIM51Q9BSJ1 452 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 CCDC28BQ9BUN5 200 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 DUSP16Q9BY84 665 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 LRMDAQ9H2I8 198 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 DPH5Q9H2P9 285 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 OLA1Q9NTK5 396 aaKnown RBP4.99□□□□□ -1.61
GYPB-212ENST00000511198 ABCF3Q9NUQ8 709 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 ARL15Q9NXU5 204 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 ARMCX3Q9UH62 379 aaPredicted RBP4.99□□□□□ -1.61
GYPB-212ENST00000511198 RARRES3Q9UL19 164 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 DAPP1Q9UN19 280 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 PTGDR2Q9Y5Y4 395 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 COL7A1Q02388 2944 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 YJEFN3A6XGL0 299 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 PDLIM1O00151 329 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 CACNB4O00305 520 aaPredicted RBP4.98□□□□□ -1.61
GYPB-212ENST00000511198 PDXKO00764 312 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 SPRY3O43610 288 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 DCTN3O75935 186 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 MTA2O94776 668 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 F10P00742 488 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 IGHEP01854 428 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 SHBGP04278 402 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 CYP1A2P05177 515 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 KLK3P07288 261 aaPredicted RBP4.98□□□□□ -1.61
GYPB-212ENST00000511198 KRT16P08779 473 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 HOXC4P09017 264 aaPredicted RBP4.98□□□□□ -1.61
GYPB-212ENST00000511198 ACAA1P09110 424 aaPredicted RBP4.98□□□□□ -1.61
GYPB-212ENST00000511198 GSTA2P09210 222 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 ATP6V1C1P21283 382 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 NR2F2P24468 414 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 PON1P27169 355 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 SERPINB3P29508 390 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 RORAP35398 523 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 SSR1P43307 286 aaKnown RBP4.98□□□□□ -1.61
GYPB-212ENST00000511198 PNLIPRP1P54315 467 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 KCNJ2P63252 427 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 ABATP80404 500 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 CAV1Q03135 178 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 GALNT1Q10472 559 aaPredicted RBP4.98□□□□□ -1.61
GYPB-212ENST00000511198 MFAP5Q13361 173 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 OLIG2Q13516 323 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 GPR18Q14330 331 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 NCF4Q15080 339 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 PFKFB4Q16877 469 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 TBRG1Q3YBR2 411 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 DCAF12L2Q5VW00 463 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 C22orf39Q6P5X5 142 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 ISLR2Q6UXK2 745 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 SCARA5Q6ZMJ2 495 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 RGS9BPQ6ZS82 235 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 INTS8Q75QN2 995 aaKnown RBP4.98□□□□□ -1.61
GYPB-212ENST00000511198 IGFN1Q86VF2 1251 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.98□□□□□ -1.61
GYPB-212ENST00000511198 RPRMLQ8N4K4 120 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 C3orf56Q8N813 242 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 ZNF527Q8NB42 609 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 SVIPQ8NHG7 77 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 CXorf40AQ8TE69 158 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 NUDCD2Q8WVJ2 157 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 MAIP1Q8WWC4 291 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 PHF21BQ96EK2 531 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 DTNBP1Q96EV8 351 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 MED30Q96HR3 178 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 MAGEB18Q96M61 343 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 FAM210AQ96ND0 272 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 LRFN5Q96NI6 719 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 REEP2Q9BRK0 252 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 SYT11Q9BT88 431 aa4.98□□□□□ -1.61
GYPB-212ENST00000511198 HDHD5Q9BXW7 423 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms