RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 MED12LQ86YW9 2145 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 CTAGE4Q8IX94 777 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 DMRTC2Q8IXT2 367 aaPredicted RBP10.05□□□□□ -0.8
RNF4-212ENST00000509258 DND1Q8IYX4 353 aaKnown RBP10.05□□□□□ -0.8
RNF4-212ENST00000509258 FAM109AQ8N4B1 249 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 TMEM251Q8N6I4 163 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 SLC22A8Q8TCC7 542 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 MZB1Q8WU39 189 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 FRG2BQ96QU4 278 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 SMC6Q96SB8 1091 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 FAM173AQ9BQD7 235 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 NTMT1Q9BV86 223 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 CNPPD1Q9BV87 410 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 LDAHQ9H6V9 325 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 ZDHHC11Q9H8X9 412 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 SACM1LQ9NTJ5 587 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 MS4A12Q9NXJ0 267 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 TMEM216Q9P0N5 145 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 ADGRE2Q9UHX3 823 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 PHF11Q9UIL8 331 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 ZNF180Q9UJW8 692 aa10.05□□□□□ -0.8
RNF4-212ENST00000509258 HRNRQ86YZ3 2850 aaPredicted RBP10.04□□□□□ -0.8
RNF4-212ENST00000509258 ANKHD1Q8IWZ3 2542 aaKnown RBP10.04□□□□□ -0.8
RNF4-212ENST00000509258 LRRC3CA6NJW4 275 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 NPIPA2E9PIF3 369 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 NPIPA3F8WFD2 350 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 PDYNP01213 254 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 KLK1P06870 262 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 HOXD4P09016 255 aaPredicted RBP10.04□□□□□ -0.8
RNF4-212ENST00000509258 RBP1P09455 135 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 RFPL3SP0C7P2 107 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 ACVR2AP27037 513 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 PEX19P40855 299 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 HTR6P50406 440 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 SERPINB9P50453 376 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 ART1P52961 327 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 NUP107P57740 925 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 PHEXP78562 749 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 GALNT1Q10472 559 aaPredicted RBP10.04□□□□□ -0.8
RNF4-212ENST00000509258 PMPCAQ10713 525 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 MYBPHQ13203 477 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 EBPQ15125 230 aaKnown RBP10.04□□□□□ -0.8
RNF4-212ENST00000509258 MPEG1Q2M385 716 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 SPRED3Q2MJR0 410 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 WLSQ5T9L3 541 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 PRAMEF20Q5VT98 475 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 BICRALQ6AI39 1079 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 DESI1Q6ICB0 168 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 KLC3Q6P597 504 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 B3GNT6Q6ZMB0 384 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 FAM47EQ6ZV65 393 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 CCDC71Q8IV32 467 aaPredicted RBP10.04□□□□□ -0.8
RNF4-212ENST00000509258 ST13P4Q8IZP2 240 aaPredicted RBP10.04□□□□□ -0.8
RNF4-212ENST00000509258 ZNF441Q8N8Z8 693 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 OR10G3Q8NGC4 313 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 OR10Q1Q8NGQ4 319 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 NUBPLQ8TB37 319 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 TANKQ92844 425 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 SARAFQ96BY9 339 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 LRRC46Q96FV0 321 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 GAL3ST4Q96RP7 486 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 PELOQ9BRX2 385 aaKnown RBP10.04□□□□□ -0.8
RNF4-212ENST00000509258 UCK2Q9BZX2 261 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 WWTR1Q9GZV5 400 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 EXO5Q9H790 373 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 IL1RL2Q9HB29 575 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 PNPLA3Q9NST1 481 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 LYARQ9NX58 379 aaKnown RBP10.04□□□□□ -0.8
RNF4-212ENST00000509258 SPRR3Q9UBC9 169 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 CES1P1Q9UKY3 287 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 EDARQ9UNE0 448 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 DTX4Q9Y2E6 619 aa10.04□□□□□ -0.8
RNF4-212ENST00000509258 TNPO3Q9Y5L0 923 aaKnown RBP10.04□□□□□ -0.8
RNF4-212ENST00000509258 A0A087WUV0 522 aaPredicted RBP10.03□□□□□ -0.8
RNF4-212ENST00000509258 KDM4EB2RXH2 506 aaPredicted RBP10.03□□□□□ -0.8
RNF4-212ENST00000509258 GOLGA8RI6L899 631 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 RIPK2O43353 540 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 DLX3O60479 287 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 WDR1O75083 606 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 NME6O75414 186 aaPredicted RBP10.03□□□□□ -0.8
RNF4-212ENST00000509258 OR4F21O95013 312 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 SEMA3DO95025 777 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 ZWINTO95229 277 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 ABHD2P08910 425 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 RHOXF2BP0C7M4 288 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 GABRA1P14867 456 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 S1PR1P21453 382 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 TLX1P31314 330 aaPredicted RBP10.03□□□□□ -0.8
RNF4-212ENST00000509258 ARL1P40616 181 aaPredicted RBP10.03□□□□□ -0.8
RNF4-212ENST00000509258 MAN2A2P49641 1150 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 ARFIP1P53367 373 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 PLIN5Q00G26 463 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 MGAT2Q10469 447 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 SLC10A1Q14973 349 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 GGTA1PQ4G0N0 100 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 GXYLT1Q4G148 440 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 RTL6Q6ICC9 239 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 METTL2BQ6P1Q9 378 aaKnown RBP10.03□□□□□ -0.8
RNF4-212ENST00000509258 ZNF585AQ6P3V2 769 aa10.03□□□□□ -0.8
RNF4-212ENST00000509258 FAM111BQ6SJ93 734 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms