RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 RDH11Q8TC12 318 aa17.24■□□□□ 0.35
UBE3D-207ENST00000509102 KLHL29Q96CT2 875 aa17.24■□□□□ 0.35
UBE3D-207ENST00000509102 SPACA9Q96E40 222 aaPredicted RBP17.24■□□□□ 0.35
UBE3D-207ENST00000509102 IQCGQ9H095 443 aaKnown RBP17.24■□□□□ 0.35
UBE3D-207ENST00000509102 RUBCNLQ9H714 662 aa17.24■□□□□ 0.35
UBE3D-207ENST00000509102 ZNF225Q9UK10 706 aa17.24■□□□□ 0.35
UBE3D-207ENST00000509102 CFL2Q9Y281 166 aa17.24■□□□□ 0.35
UBE3D-207ENST00000509102 G3V3Y1 287 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 ERAL1O75616 437 aaKnown RBP17.23■□□□□ 0.35
UBE3D-207ENST00000509102 WISP2O76076 250 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 COL8A1P27658 744 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 CRHR1P34998 444 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 KCNJ2P63252 427 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 EBPQ15125 230 aaKnown RBP17.23■□□□□ 0.35
UBE3D-207ENST00000509102 CMPK2Q5EBM0 449 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 OR7G1Q8NGA0 311 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 DOK4Q8TEW6 326 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 AGAP11Q8TF27 550 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 ITLN2Q8WWU7 325 aaPredicted RBP17.23■□□□□ 0.35
UBE3D-207ENST00000509102 TTTY12Q9BZ98 90 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 IL1RL2Q9HB29 575 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 MID1IP1Q9NPA3 183 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 PFDN4Q9NQP4 134 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 DEPPQ9NTK1 212 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 CNIH4Q9P003 139 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 MCM8Q9UJA3 840 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 MEMO1Q9Y316 297 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 KLF2Q9Y5W3 355 aaPredicted RBP17.23■□□□□ 0.35
UBE3D-207ENST00000509102 UNC79Q9P2D8 2635 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 MYO7BQ6PIF6 2116 aa17.23■□□□□ 0.35
UBE3D-207ENST00000509102 A0A1B0GTH9 108 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 FAM166BA8MTA8 275 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 E9PLN8 166 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 TP53I11O14683 189 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 PCDH7O60245 1069 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 TPOP07202 933 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 KRT4P19013 534 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 AGAP20933 346 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 SSTR4P31391 388 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 DCTP40126 519 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 RPP38P78345 283 aaKnown RBP17.22■□□□□ 0.35
UBE3D-207ENST00000509102 IFFO1Q0D2I5 559 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 IMPG1Q17R60 797 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 ZNF791Q3KP31 576 aaPredicted RBP17.22■□□□□ 0.35
UBE3D-207ENST00000509102 TCHHL1Q5QJ38 904 aaPredicted RBP17.22■□□□□ 0.35
UBE3D-207ENST00000509102 SAMD14Q8IZD0 417 aaPredicted RBP17.22■□□□□ 0.35
UBE3D-207ENST00000509102 VWA5B2Q8N398 1253 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 FAM109AQ8N4B1 249 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 FAM57AQ8TBR7 257 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 EPS8L3Q8TE67 593 aaKnown RBP17.22■□□□□ 0.35
UBE3D-207ENST00000509102 CHTF18Q8WVB6 975 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 UCN3Q969E3 161 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 TP53INP1Q96A56 240 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 TM4SF18Q96CE8 201 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 VKORC1Q9BQB6 163 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 BRINP2Q9C0B6 783 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 DEFB127Q9H1M4 99 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 OR10A5Q9H207 317 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 GIMAP4Q9NUV9 329 aa17.22■□□□□ 0.35
UBE3D-207ENST00000509102 BOKQ9UMX3 212 aaPredicted RBP17.22■□□□□ 0.35
UBE3D-207ENST00000509102 CROCCQ5TZA2 2017 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 G3V2L1 256 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 PLIN3O60664 434 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 PDE9AO76083 593 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 PROCP04070 461 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 FBXO45P0C2W1 286 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 CCL3P10147 92 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 DRD2P14416 443 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 CPA3P15088 417 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 GSTM5P46439 218 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 NR0B1P51843 470 aaKnown RBP17.21■□□□□ 0.35
UBE3D-207ENST00000509102 NAGLUP54802 743 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 FUT7Q11130 342 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 HEPACAMQ14CZ8 416 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 SPDYAQ5MJ70 313 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 TBCELQ5QJ74 424 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 ZNF787Q6DD87 383 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 DOLPP1Q86YN1 238 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 LRRC25Q8N386 305 aaPredicted RBP17.21■□□□□ 0.35
UBE3D-207ENST00000509102 RIBC1Q8N443 379 aaPredicted RBP17.21■□□□□ 0.35
UBE3D-207ENST00000509102 OR52N2Q8NGI0 321 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 PAQR8Q8TEZ7 354 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 ACPTQ9BZG2 426 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 GSTO2Q9H4Y5 243 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 CHST11Q9NPF2 352 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 B4GALT7Q9UBV7 327 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 EMCNQ9ULC0 261 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 ENTPD4Q9Y227 616 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 TIMM22Q9Y584 194 aa17.21■□□□□ 0.35
UBE3D-207ENST00000509102 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.21■□□□□ 0.35
UBE3D-207ENST00000509102 TLDC2A0PJX2 215 aa17.2■□□□□ 0.34
UBE3D-207ENST00000509102 PINLYPA6NC86 204 aa17.2■□□□□ 0.34
UBE3D-207ENST00000509102 ZNF354AO60765 605 aaPredicted RBP17.2■□□□□ 0.34
UBE3D-207ENST00000509102 NADKO95544 446 aaPredicted RBP17.2■□□□□ 0.34
UBE3D-207ENST00000509102 ATP1B1P05026 303 aa17.2■□□□□ 0.34
UBE3D-207ENST00000509102 FEN1P39748 380 aaKnown RBP17.2■□□□□ 0.34
UBE3D-207ENST00000509102 DNASE1L1P49184 302 aa17.2■□□□□ 0.34
UBE3D-207ENST00000509102 DNAJB13P59910 316 aa17.2■□□□□ 0.34
UBE3D-207ENST00000509102 FRMD7Q6ZUT3 714 aa17.2■□□□□ 0.34
UBE3D-207ENST00000509102 CD163Q86VB7 1156 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms