RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 ZNF639Q9UID6 485 aa16.83■□□□□ 0.28
CLDND1-220ENST00000508902 PCDHGB6Q9Y5F9 930 aa16.83■□□□□ 0.28
CLDND1-220ENST00000508902 WDR91A4D1P6 747 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 PINLYPA6NC86 204 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 OR10H2O60403 315 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 ERAL1O75616 437 aaKnown RBP16.82■□□□□ 0.28
CLDND1-220ENST00000508902 FGF4P08620 206 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 ANXA4P09525 319 aaPredicted RBP16.82■□□□□ 0.28
CLDND1-220ENST00000508902 LINC00032P0C843 101 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 COX7A2P14406 83 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 PIK3R1P27986 724 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 ALDH9A1P49189 494 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 NR0B1P51843 470 aaKnown RBP16.82■□□□□ 0.28
CLDND1-220ENST00000508902 WDR4P57081 412 aaKnown RBP16.82■□□□□ 0.28
CLDND1-220ENST00000508902 INAQ16352 499 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 EIF2S3LQ2VIR3 472 aaKnown RBP16.82■□□□□ 0.28
CLDND1-220ENST00000508902 XKR7Q5GH72 579 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 FAM71E1Q6IPT2 247 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 SLC25A25Q6KCM7 469 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 ADCY4Q8NFM4 1077 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 TWIST2Q8WVJ9 160 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 NR4A3Q92570 626 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 TLCD1Q96CP7 247 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 KLHL29Q96CT2 875 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 EGLN2Q96KS0 407 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 PELOQ9BRX2 385 aaKnown RBP16.82■□□□□ 0.28
CLDND1-220ENST00000508902 WWTR1Q9GZV5 400 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 ANKRA2Q9H9E1 313 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 ABI3Q9P2A4 366 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 YARS2Q9Y2Z4 477 aaKnown RBP16.82■□□□□ 0.28
CLDND1-220ENST00000508902 TRAF6Q9Y4K3 522 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 ACTL7BQ9Y614 415 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 ZNF407Q9C0G0 2248 aa16.82■□□□□ 0.28
CLDND1-220ENST00000508902 DIDO1Q9BTC0 2240 aaKnown RBP16.81■□□□□ 0.28
CLDND1-220ENST00000508902 GNG14A0A1W2PPG7 69 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 FCHO1O14526 889 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 PIP5K1BO14986 540 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 LSM1O15116 133 aaKnown RBP16.81■□□□□ 0.28
CLDND1-220ENST00000508902 SEMA7AO75326 666 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 VPS4BO75351 444 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 NME6O75414 186 aaPredicted RBP16.81■□□□□ 0.28
CLDND1-220ENST00000508902 CRCPO75575 148 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 CBX7O95931 251 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 ATP1B1P05026 303 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 PORP16435 677 aaPredicted RBP16.81■□□□□ 0.28
CLDND1-220ENST00000508902 CYB561P49447 251 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 SSR4P51571 173 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 ASPHQ12797 758 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 BIKQ13323 160 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 PIGGQ5H8A4 983 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 SPDYAQ5MJ70 313 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 SH2D4BQ5SQS7 431 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 NOXRED1Q6NXP6 359 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.81■□□□□ 0.28
CLDND1-220ENST00000508902 ATCAYQ86WG3 371 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 SIAH3Q8IW03 269 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 GALNT12Q8IXK2 581 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 CYP4Z2PQ8N1L4 340 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 CPSF7Q8N684 471 aaKnown RBP16.81■□□□□ 0.28
CLDND1-220ENST00000508902 NUBPLQ8TB37 319 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 CTHRC1Q96CG8 243 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 SORT1Q99523 831 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 TMBIM4Q9HC24 238 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 UTS2RQ9UKP6 389 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 VPS4AQ9UN37 437 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 ICE1Q9Y2F5 2266 aa16.81■□□□□ 0.28
CLDND1-220ENST00000508902 RASAL1O95294 804 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 SDC1P18827 310 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 NT5EP21589 574 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 MRPS35P82673 323 aaKnown RBP16.8■□□□□ 0.28
CLDND1-220ENST00000508902 ZNF763Q0D2J5 394 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 CASP8Q14790 479 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 EXOSC7Q15024 291 aaKnown RBP16.8■□□□□ 0.28
CLDND1-220ENST00000508902 CEBPEQ15744 281 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 CHI3L2Q15782 390 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 IMPG1Q17R60 797 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 MPEG1Q2M385 716 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 RFTN2Q52LD8 501 aaPredicted RBP16.8■□□□□ 0.28
CLDND1-220ENST00000508902 TRMT12Q53H54 448 aaKnown RBP16.8■□□□□ 0.28
CLDND1-220ENST00000508902 ZNF628Q5EBL2 1059 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 FAM180AQ6UWF9 173 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 IL20RBQ6UXL0 311 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 TMEM64Q6YI46 380 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 CHERPQ8IWX8 916 aaKnown RBP16.8■□□□□ 0.28
CLDND1-220ENST00000508902 BCORP1Q8N888 145 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 ST6GALNAC3Q8NDV1 305 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 ADIPOR1Q96A54 375 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 EXOSC8Q96B26 276 aaKnown RBP16.8■□□□□ 0.28
CLDND1-220ENST00000508902 TSPAN10Q9H1Z9 355 aaPredicted RBP16.8■□□□□ 0.28
CLDND1-220ENST00000508902 LRTM1Q9HBL6 345 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 SH2D2AQ9NP31 389 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 MYNNQ9NPC7 610 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 OLAHQ9NV23 265 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 COPS7AQ9UBW8 275 aa16.8■□□□□ 0.28
CLDND1-220ENST00000508902 NINQ8N4C6 2090 aa16.79■□□□□ 0.28
CLDND1-220ENST00000508902 ANKUB1A6NFN9 424 aa16.79■□□□□ 0.28
CLDND1-220ENST00000508902 TM9SF1O15321 606 aa16.79■□□□□ 0.28
CLDND1-220ENST00000508902 ZNHIT1O43257 154 aa16.79■□□□□ 0.28
CLDND1-220ENST00000508902 CD46P15529 392 aa16.79■□□□□ 0.28
CLDND1-220ENST00000508902 PCSK2P16519 638 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms