RNA–Protein interactions for RNA: ENST00000493662.6

MSH5-SAPCD1-207, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene MSH5-SAPCD1, Length 3,991 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-207ENST00000493662 CDC20Q12834 499 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 POMZP3Q6PJE2 187 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 SRFBP1Q8NEF9 429 aaKnown RBP10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 SLC5A11Q8WWX8 675 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ARSGQ96EG1 525 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ALG14Q96F25 216 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 GSDMCQ9BYG8 508 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 LTB4R2Q9NPC1 389 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ZCCHC3Q9NUD5 404 aaKnown RBP10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 RUVBL1Q9Y265 456 aaKnown RBP10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 OR51B4Q9Y5P0 310 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ZNF638Q14966 1978 aaKnown RBP10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 OR10H3O60404 316 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 PRKRAO75569 313 aaKnown RBP10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 IL3P08700 152 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ETFAP13804 333 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ATP4BP51164 291 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ZMYND11Q15326 602 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 NNATQ16517 81 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 KIAA1614Q5VZ46 1190 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 CHRDL2Q6WN34 429 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 RNF130Q86XS8 419 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 MMP21Q8N119 569 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 GHDCQ8N2G8 530 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 POP5Q969H6 163 aaKnown RBP10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 RIPOR3Q96MK2 946 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 GPR174Q9BXC1 333 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 MBNL1Q9NR56 388 aaKnown RBP10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 M0R233 179 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 SDC1P18827 310 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 FAPQ12884 760 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ZNF77Q15935 545 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 SWI5Q1ZZU3 235 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 MACC1Q6ZN28 852 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 LSRQ86X29 649 aaPredicted RBP10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 CCDC116Q8IYX3 515 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 RPLP0P6Q8NHW5 317 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ISL2Q96A47 359 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ASB16Q96NS5 453 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 DOK1Q99704 481 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 CDADC1Q9BWV3 514 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 OR51E2Q9H255 320 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 MRPS30Q9NP92 439 aaKnown RBP10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 FBXO8Q9NRD0 319 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 RAD18Q9NS91 495 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 SERGEFQ9UGK8 458 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 PPIEQ9UNP9 301 aaKnown RBP10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 CMAHPQ9Y471 501 aa10.24□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 A0A1W2PQ09 198 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 LRRC72A6NJI9 287 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 TNFRSF11BO00300 401 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 KLHL18O94889 574 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 TOXO94900 526 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 TP53P04637 393 aaPredicted RBP10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 CDKN2CP42773 168 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ILF3Q12906 894 aaKnown RBP eCLIP10.23□□□□□ -0.778e-7■■□□□ 11.6
MSH5-SAPCD1-207ENST00000493662 SPATS1Q496A3 300 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 PRRT3Q5FWE3 981 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ZNF776Q68DI1 518 aaPredicted RBP10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 PRSS48Q7RTY5 328 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 SDR16C5Q8N3Y7 309 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 FAM86B1Q8N7N1 296 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 WDR48Q8TAF3 677 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ASB11Q8WXH4 323 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ASB15Q8WXK1 588 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 MYADMQ96S97 322 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 SLC12A9Q9BXP2 914 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 STARD5Q9NSY2 213 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ZIM2Q9NZV7 527 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 CDV3Q9UKY7 258 aaKnown RBP10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 RNGTTO60942 597 aaKnown RBP10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 CREG1O75629 220 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 LATS1O95835 1130 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 BCHEP06276 602 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 FHP07954 510 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 STSP08842 583 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 DNAJA1P31689 397 aaKnown RBP10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 HTR3AP46098 478 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 HNMTP50135 292 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ETV1P50549 477 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 DSTNP60981 165 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ST3GAL4Q11206 333 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 CRTC2Q53ET0 693 aaPredicted RBP10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 ANKRD34AQ69YU3 496 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 PAMR1Q6UXH9 720 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 CFAP77Q6ZQR2 320 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 FAM160A2Q8N612 972 aaPredicted RBP10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 MEIOBQ8N635 442 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 C10orf53Q8N6V4 93 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 GLB1L3Q8NCI6 653 aaPredicted RBP10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 VN1R2Q8NFZ6 395 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 OR8K5Q8NH50 307 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 NFKBIDQ8NI38 313 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 C9orf43Q8TAL5 461 aaPredicted RBP10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 TESCQ96BS2 214 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 OTUB2Q96DC9 234 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 CRELD1Q96HD1 420 aa10.23□□□□□ -0.77
MSH5-SAPCD1-207ENST00000493662 TM9SF2Q99805 663 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms