RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	NAP1L3	Q99457	506 aa	Predicted RBP	4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	SLITRK2	Q9H156	845 aa		4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	CCDC68	Q9H2F9	335 aa		4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	CDC42EP4	Q9H3Q1	356 aa	Known RBP	4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	NGB	Q9NPG2	151 aa		4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	ESM1	Q9NQ30	184 aa		4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	FAM114A2	Q9NRY5	505 aa		4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	CBLN4	Q9NTU7	201 aa		4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	DDX28	Q9NUL7	540 aa	Known RBP	4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	TMEM184C	Q9NVA4	438 aa		4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	MOCS1	Q9NZB8	636 aa		4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	BFAR	Q9NZS9	450 aa		4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	PAK5	Q9P286	719 aa		4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	HEY2	Q9UBP5	337 aa		4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	CNOT11	Q9UKZ1	510 aa	Known RBP	4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	USP22	Q9UPT9	525 aa		4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	C15orf41	Q9Y2V0	281 aa		4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	MMACHC	Q9Y4U1	282 aa		4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	IKBKG	Q9Y6K9	419 aa		4.82	□□□□□ -1.64
SEC13-219	ENST00000492602	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.82	□□□□□ -1.64	1e-11	■□□□□ 8.3
SEC13-219	ENST00000492602	SACS	Q9NZJ4	4579 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	MYOCOS	A0A1B0GUC4	107 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	SLC22A20	A6NK97	555 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	EIF3F	O00303	357 aa	Predicted RBP	4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	GNB5	O14775	395 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	SCAMP2	O15127	329 aa	Known RBP	4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	PJA2	O43164	708 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	NDUFS4	O43181	175 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	LCMT2	O60294	686 aa	Known RBP	4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	METTL18	O95568	372 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	SERPIND1	P05546	499 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	NUDT17	P0C025	328 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	ZNF888	P0CJ79	500 aa	Predicted RBP	4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	ERG	P11308	486 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	TNNI3	P19429	210 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	EPHA1	P21709	976 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	AOAH	P28039	575 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	SERPINB3	P29508	390 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	GCH1	P30793	250 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	IL2RG	P31785	369 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	TTK	P33981	857 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	GDF10	P55107	478 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	CDH11	P55287	796 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	UBA52	P62987	128 aa	Known RBP	4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	CDK16	Q00536	496 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	IRF9	Q00978	393 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	BSPH1	Q075Z2	132 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	ZNF844	Q08AG5	666 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	TBX2	Q13207	712 aa	Predicted RBP	4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	KLF1	Q13351	362 aa	Predicted RBP	4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	DOC2A	Q14183	400 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	ARHGAP19	Q14CB8	494 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	ELAVL1	Q15717	326 aa	Known RBP	4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	TBCEL	Q5QJ74	424 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	FNDC7	Q5VTL7	733 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	ARMC3	Q5W041	872 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	BICRAL	Q6AI39	1079 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	C11orf71	Q6IPW1	123 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	C11orf87	Q6NUJ2	197 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	NIPAL1	Q6NVV3	410 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	AFTPH	Q6ULP2	937 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	CLNK	Q7Z7G1	428 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	PACS2	Q86VP3	889 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	CILP2	Q8IUL8	1156 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	TBC1D19	Q8N5T2	526 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	MORN4	Q8NDC4	146 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	PEX13	Q92968	403 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	RHBDF1	Q96CC6	855 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	CTHRC1	Q96CG8	243 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	ZNF778	Q96MU6	729 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	RILP	Q96NA2	401 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	TCF12	Q99081	682 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	CARD6	Q9BX69	1037 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	SUCNR1	Q9BXA5	334 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	BPESC1	Q9GZL8	116 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	FN3KRP	Q9HA64	309 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	FANCF	Q9NPI8	374 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	PRTFDC1	Q9NRG1	225 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	PDP1	Q9P0J1	537 aa	Predicted RBP	4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	FETUB	Q9UGM5	382 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	SLC2A6	Q9UGQ3	507 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	PTBP2	Q9UKA9	531 aa	Known RBP	4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	RIMKLB	Q9ULI2	386 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	DLGAP4	Q9Y2H0	992 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	ZKSCAN5	Q9Y2L8	839 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	PPIAL4A	Q9Y536	164 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	RYR1	P21817	5038 aa		4.81	□□□□□ -1.64
SEC13-219	ENST00000492602	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	TCRBV7S2A1N4T	A0A589	114 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	ANKRD33B	A6NCL7	494 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	DPRX	A6NFQ7	191 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602		E5RI56	91 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602		E7ENX8	843 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602		H7C417	338 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602		M0QZ24	198 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	HCRTR2	O43614	444 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	CEP104	O60308	925 aa		4.8	□□□□□ -1.64
SEC13-219	ENST00000492602	PDE5A	O76074	875 aa		4.8	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms