RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 ZNF578Q96N58 590 aaPredicted RBP10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 UROC1Q96N76 676 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 OPALINQ96PE5 141 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 TMEM43Q9BTV4 400 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 COPS3Q9UNS2 423 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 FCF1Q9Y324 198 aaKnown RBP10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 OR6C74A6NCV1 312 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 CXCL11O14625 94 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 PRRG1O14668 218 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 FMO6PO60774 539 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 PAK4O96013 591 aaPredicted RBP10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 GABRA5P31644 462 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 CAPZA2P47755 286 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 TAS2R50P59544 299 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 KIAA1024LP59773 190 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 YBX1P67809 324 aaKnown RBP10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 LRIF1Q5T3J3 769 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 HACD4Q5VWC8 232 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 PRAMEF13Q5VWM6 474 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 THOC6Q86W42 341 aaKnown RBP10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 ANKK1Q8NFD2 765 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 C15orf40Q8WUR7 153 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 FCAMRQ8WWV6 532 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 TM9SF4Q92544 642 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 ZDHHC6Q9H6R6 413 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 TMEM185BQ9H7F4 350 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 SCPEP1Q9HB40 452 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 THSD1Q9NS62 852 aa10.77□□□□□ -0.69
CRNKL1-204ENST00000490910 DOT1LQ8TEK3 1739 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 SHROOM3Q8TF72 1996 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 GLI3P10071 1580 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 NINQ8N4C6 2090 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 H7C4K7 107 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 J3KTA2 159 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 PRODHO43272 600 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 MMP20O60882 483 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 ATXN1LP0C7T5 689 aaKnown RBP10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 JUPP14923 745 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 SUOXP51687 545 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 RPS13P62277 151 aaKnown RBP10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 GPR176Q14439 515 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 C17orf107Q6ZR85 190 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 OR4K5Q8NGD3 323 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 OR6M1Q8NGM8 313 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 IGSF8Q969P0 613 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 TRIM43Q96BQ3 446 aaPredicted RBP10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 ZBED6CLQ96FA7 236 aaPredicted RBP10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 SFXN2Q96NB2 322 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 WDFY2Q96P53 400 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 C12orf57Q99622 126 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 ADAM2Q99965 735 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 C7orf50Q9BRJ6 194 aaKnown RBP10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 ZCCHC3Q9NUD5 404 aaKnown RBP10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 ZDHHC3Q9NYG2 299 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 RPS6KB2Q9UBS0 482 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 SLC25A13Q9UJS0 675 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 COL2A1P02458 1487 aaPredicted RBP10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 A0A0D9SEW6 157 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 OR2AG2A6NM03 316 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 FZD9O00144 591 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 SSX5O60225 188 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 ATXN8OSP0DMR3 200 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 GPX2P18283 190 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 PTBP1P26599 531 aaKnown RBP eCLIP10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 TAS2R43P59537 309 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 RAB40BQ12829 278 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 ATXN7L3Q14CW9 347 aaPredicted RBP10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 PAQR7Q86WK9 346 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 ACBD7Q8N6N7 88 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 ADAMTS14Q8WXS8 1223 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 S100A16Q96FQ6 103 aaKnown RBP10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 IMP3Q9NV31 184 aaKnown RBP10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 RLIMQ9NVW2 624 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 TMEM5Q9Y2B1 443 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 SULT1B1O43704 296 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 LDOC1O95751 146 aaPredicted RBP10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 GASTP01350 101 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 CKMP06732 381 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 KLK1P06870 262 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 TIA1P31483 386 aaKnown RBP eCLIP10.76□□□□□ -0.692e-9■■■■□ 26.7
CRNKL1-204ENST00000490910 RBM34P42696 430 aaKnown RBP10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 STK19P49842 368 aaPredicted RBP10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 ERVK-21P61565 698 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 MLLT1Q03111 559 aaPredicted RBP10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 HYAL2Q12891 473 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 C9orf64Q5T6V5 341 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 LIPJQ5W064 366 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 LYPD4Q6UWN0 246 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 TMC8Q8IU68 726 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 FAM98AQ8NCA5 519 aaKnown RBP10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 STOML3Q8TAV4 291 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 ARRDC2Q8TBH0 407 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 CNOT9Q92600 299 aaKnown RBP10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 OSTF1Q92882 214 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 EQTNQ9NQ60 294 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 ZNF175Q9Y473 711 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 ACTL7AQ9Y615 435 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 PDE4DIPQ5VU43 2346 aa10.76□□□□□ -0.69
CRNKL1-204ENST00000490910 ARL5CA6NH57 179 aa10.75□□□□□ -0.69
CRNKL1-204ENST00000490910 WASH4PA8MWX3 477 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms