RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 CD3EAPO15446 510 aaKnown RBP6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 OR1F1O43749 312 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 KIAA0513O60268 411 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 METTL18O95568 372 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 ETHE1O95571 254 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 SYF2O95926 243 aaKnown RBP6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 FTCDO95954 541 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 TNNT1P13805 278 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 CREB1P16220 341 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 PPP3CBP16298 524 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 CTNNA2P26232 953 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 PTPN6P29350 595 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 GRK3P35626 688 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 HNF4AP41235 474 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 LHX2P50458 406 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 NUDT6P53370 316 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 CLDN18P56856 261 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 DSCR9P59020 149 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 ACTG1P63261 375 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 RGS1Q08116 209 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 ZNF844Q08AG5 666 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 SLC13A2Q13183 592 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 RUNX2Q13950 521 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 GUSBP1Q15486 140 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 NRF1Q16656 503 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 PHKG1Q16816 387 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 CR1LQ2VPA4 569 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 CLEC2AQ6UVW9 174 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 GRAMD2AQ8IUY3 354 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 ZNF595Q8IYB9 648 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 DND1Q8IYX4 353 aaKnown RBP6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 SLC15A4Q8N697 577 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 ZNF525Q8N782 197 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 CNEP1R1Q8N9A8 125 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 ZNF610Q8N9Z0 462 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 ACTL9Q8TC94 416 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 C10orf105Q8TEF2 133 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 ATL1Q8WXF7 558 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 LPGAT1Q92604 370 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 REPS1Q96D71 796 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 RILPQ96NA2 401 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 CSF3RQ99062 836 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 KLHL4Q9C0H6 718 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 PCBD2Q9H0N5 130 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 RASSF4Q9H2L5 321 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 EIF2B3Q9NR50 452 aaKnown RBP6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 ZFP69BQ9UJL9 534 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 AMFRQ9UKV5 643 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 B3GALT5Q9Y2C3 310 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 HYOU1Q9Y4L1 999 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 RNF115Q9Y4L5 304 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 BZW2Q9Y6E2 419 aaKnown RBP6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 RYR1P21817 5038 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 DNAH9Q9NYC9 4486 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 HYDINQ4G0P3 5121 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 A0A0A6YYJ9 748 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 A0A1W2PP18 115 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 C17orf105B2RV13 164 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 SLCO1B7G3V0H7 640 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 HRKO00198 91 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 CYR61O00622 381 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 EMC8O43402 210 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 SERPINC1P01008 464 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 IFNA16P05015 189 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 SERPING1P05155 500 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 SERPIND1P05546 499 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 CCDC166P0CW27 439 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 RBP3P10745 1247 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 NPPBP16860 134 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 USF1P22415 310 aaPredicted RBP6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 AHRP35869 848 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 RPL21P46778 160 aaKnown RBP6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 KCNJ5P48544 419 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 MARCKSL1P49006 195 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 CCR8P51685 355 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 CLCN7P51798 805 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 GFRA1P56159 465 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 RAB38P57729 211 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 UBE2HP62256 183 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 SIRPAP78324 504 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 PRAMEP78395 509 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 IRX1P78414 480 aaPredicted RBP6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 SRYQ05066 204 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 RPS6KA2Q15349 733 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 ZNF672Q499Z4 452 aaPredicted RBP6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 ODF2Q5BJF6 829 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 TIGD3Q6B0B8 471 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 SCIMPQ6UWF3 145 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 LCTLQ6UWM7 567 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 CYHR1Q6ZMK1 362 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 STAC2Q6ZMT1 411 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 MBOAT1Q6ZNC8 495 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 CDKL3Q8IVW4 592 aaPredicted RBP6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 MPP5Q8N3R9 675 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 ANKRD53Q8N9V6 530 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 FAM47BQ8NA70 645 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 MCUQ8NE86 351 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 OR8K1Q8NGG5 319 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 SLC35G2Q8TBE7 412 aa6.38□□□□□ -1.39
PDLIM1-203ENST00000490391 CTNNBL1Q8WYA6 563 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms