RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 RIT1Q92963 219 aa15.53■□□□□ 0.08
TOP3B-217ENST00000489581 RILPQ96NA2 401 aa15.53■□□□□ 0.08
TOP3B-217ENST00000489581 YIPF4Q9BSR8 244 aa15.53■□□□□ 0.08
TOP3B-217ENST00000489581 PRDM14Q9GZV8 571 aa15.53■□□□□ 0.08
TOP3B-217ENST00000489581 NEUROD4Q9HD90 331 aa15.53■□□□□ 0.08
TOP3B-217ENST00000489581 PHF11Q9UIL8 331 aa15.53■□□□□ 0.08
TOP3B-217ENST00000489581 TLN2Q9Y4G6 2542 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 DNHD1Q96M86 4753 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 C2orf92A0A1B0GVN3 265 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 OR6C76A6NM76 312 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 CLCA1A8K7I4 914 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 E7ESA3 106 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 PLPP1O14494 284 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 TP53I11O14683 189 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 TP73O15350 636 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 SEC31AO94979 1220 aaKnown RBP15.52■□□□□ 0.08
TOP3B-217ENST00000489581 STMN1P16949 149 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 BMP7P18075 431 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 SSTR4P31391 388 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 BUD31P41223 144 aaPredicted RBP15.52■□□□□ 0.08
TOP3B-217ENST00000489581 MASP1P48740 699 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 DCAF7P61962 342 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 DR1Q01658 176 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 RPS6KA2Q15349 733 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 SF3B4Q15427 424 aaKnown RBP eCLIP15.52■□□□□ 0.085e-8■■■■■ 30.2
TOP3B-217ENST00000489581 EIPR1Q53HC9 387 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 WIPI1Q5MNZ9 446 aaPredicted RBP15.52■□□□□ 0.08
TOP3B-217ENST00000489581 DCST1Q5T197 706 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 FNDC7Q5VTL7 733 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 CLEC9AQ6UXN8 241 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 ZBED8Q8IZ13 594 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 ZCCHC7Q8N3Z6 543 aaKnown RBP15.52■□□□□ 0.08
TOP3B-217ENST00000489581 HUS1BQ8NHY5 278 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 SPPL2AQ8TCT8 520 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 UCN3Q969E3 161 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 WDYHV1Q96HA8 205 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 MTERF1Q99551 399 aaKnown RBP15.52■□□□□ 0.08
TOP3B-217ENST00000489581 PELOQ9BRX2 385 aaKnown RBP15.52■□□□□ 0.08
TOP3B-217ENST00000489581 UGT2B28Q9BY64 529 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 UBQLN3Q9H347 655 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 ALG9Q9H6U8 611 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 NPFFR2Q9Y5X5 522 aa15.52■□□□□ 0.08
TOP3B-217ENST00000489581 MBD3L4A6NDZ8 208 aaPredicted RBP15.51■□□□□ 0.07
TOP3B-217ENST00000489581 MBD3L3A6NE82 208 aaPredicted RBP15.51■□□□□ 0.07
TOP3B-217ENST00000489581 MBD3L5A6NJ08 208 aaPredicted RBP15.51■□□□□ 0.07
TOP3B-217ENST00000489581 CD8B2A6NJW9 211 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 CAPN14A8MX76 684 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 SNX4O95219 450 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 HPNP05981 417 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 CD53P19397 219 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 SERPINB1P30740 379 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 OPRM1P35372 400 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 SORDQ00796 357 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 PCBP2Q15366 365 aaKnown RBP eCLIP15.51■□□□□ 0.07
TOP3B-217ENST00000489581 HLA-DQA1Q5Y7H0 255 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 GRHL2Q6ISB3 625 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 PACS2Q86VP3 889 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 MYLK4Q86YV6 388 aaPredicted RBP15.51■□□□□ 0.07
TOP3B-217ENST00000489581 KRTAP1-3Q8IUG1 177 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 ZNF441Q8N8Z8 693 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 MBD3L2Q8NHZ7 208 aaPredicted RBP15.51■□□□□ 0.07
TOP3B-217ENST00000489581 ABTB1Q969K4 478 aaPredicted RBP15.51■□□□□ 0.07
TOP3B-217ENST00000489581 UBXN10Q96LJ8 280 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 GPR22Q99680 433 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 CENPKQ9BS16 269 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 ANGPTL4Q9BY76 406 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 SNX15Q9NRS6 342 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 RYDENQ9NUL5 291 aaKnown RBP15.51■□□□□ 0.07
TOP3B-217ENST00000489581 TEX10Q9NXF1 929 aaPredicted RBP15.51■□□□□ 0.07
TOP3B-217ENST00000489581 TXNDC16Q9P2K2 825 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 OPTCQ9UBM4 332 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 ADGRE2Q9UHX3 823 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 C15orf41Q9Y2V0 281 aa15.51■□□□□ 0.07
TOP3B-217ENST00000489581 CSPG4Q6UVK1 2322 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 A0A1W2PPR1 153 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 A0A1W2PR48 441 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 A0A1W2PS29 197 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 SUPT3HB4E1H0 165 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 K7EPI3 171 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 GNB5O14775 395 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 TMPRSS11DO60235 418 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 SUPT3HO75486 399 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 EEDO75530 441 aaKnown RBP15.5■□□□□ 0.07
TOP3B-217ENST00000489581 HRGP04196 525 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 SSTR1P30872 391 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 CASP3P42574 277 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 RPS13P62277 151 aaKnown RBP15.5■□□□□ 0.07
TOP3B-217ENST00000489581 NKX6-1P78426 367 aaPredicted RBP15.5■□□□□ 0.07
TOP3B-217ENST00000489581 ILF2Q12905 390 aaKnown RBP15.5■□□□□ 0.07
TOP3B-217ENST00000489581 NHSL2Q5HYW2 709 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 MRM1Q6IN84 353 aaKnown RBP15.5■□□□□ 0.07
TOP3B-217ENST00000489581 TAOK1Q7L7X3 1001 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 PRR22Q8IZ63 422 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 C9orf106Q8NAJ2 232 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 STAG3L4Q8TBR4 150 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 TP53INP1Q96A56 240 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 RBBP8Q99708 897 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 RBM24Q9BX46 236 aaKnown RBP15.5■□□□□ 0.07
TOP3B-217ENST00000489581 CALHM2Q9HA72 323 aa15.5■□□□□ 0.07
TOP3B-217ENST00000489581 NUDT4Q9NZJ9 180 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms