RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 COQ3Q9NZJ6 369 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 TINAGQ9UJW2 476 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 UTS2RQ9UKP6 389 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 PCDHA9Q9Y5H5 950 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 CLDN16Q9Y5I7 305 aa8.45□□□□□ -1.06
HDAC6-232ENST00000489053 A0A1W2PPM1 405 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 PPP6CO00743 305 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 PGRMC2O15173 223 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 SLU7O95391 586 aaKnown RBP8.44□□□□□ -1.06
HDAC6-232ENST00000489053 SHBGP04278 402 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 IGKV3-11P04433 115 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 ANXA4P09525 319 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-232ENST00000489053 RNF224P0DH78 156 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 CNR1P21554 472 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 SSTR4P31391 388 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 PTGER1P34995 402 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 CRHR1P34998 444 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 GCKP35557 465 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 KRT20P35900 424 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 FEN1P39748 380 aaKnown RBP8.44□□□□□ -1.06
HDAC6-232ENST00000489053 MASP1P48740 699 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 NR0B1P51843 470 aaKnown RBP8.44□□□□□ -1.06
HDAC6-232ENST00000489053 NAGLUP54802 743 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 HSF1Q00613 529 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 TCHHL1Q5QJ38 904 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-232ENST00000489053 PRAMEF20Q5VT98 475 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 SLC48A1Q6P1K1 146 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 EMBQ6PCB8 327 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 CD163Q86VB7 1156 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 TDRPQ86YL5 185 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 SIAH3Q8IW03 269 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 HOMEZQ8IX15 550 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 RIBC1Q8N443 379 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-232ENST00000489053 ZNF808Q8N4W9 903 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-232ENST00000489053 ZFP62Q8NB50 900 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-232ENST00000489053 OR2M7Q8NG81 312 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 PPP1R14CQ8TAE6 165 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 AGAP11Q8TF27 550 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 DIO2Q92813 273 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 CCDC120Q96HB5 630 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 SMC6Q96SB8 1091 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 DOHHQ9BU89 302 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 ZNF717Q9BY31 904 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-232ENST00000489053 OR10A5Q9H207 317 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 CXorf21Q9HAI6 301 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 IL1RL2Q9HB29 575 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 MIEF1Q9NQG6 463 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 RRAGDQ9NQL2 400 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-232ENST00000489053 CNIH4Q9P003 139 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 MCM8Q9UJA3 840 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 ACAD8Q9UKU7 415 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 DLGAP4Q9Y2H0 992 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 TIMM22Q9Y584 194 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.44□□□□□ -1.06
HDAC6-232ENST00000489053 CRYBG3Q68DQ2 2970 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 SCN2AQ99250 2005 aa8.44□□□□□ -1.06
HDAC6-232ENST00000489053 CELSR2Q9HCU4 2923 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 A0A1B0GTH9 108 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 ATP6AP2A0A1C7CYW4 349 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 WIPF3A6NGB9 483 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 FIGNL2A6NMB9 653 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 WASHC1A8K0Z3 465 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 HRKO00198 91 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 PLIN3O60664 434 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 ATP6AP2O75787 350 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 BCAS2O75934 225 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-232ENST00000489053 PROCP04070 461 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 IL3P08700 152 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 SBK3P0C264 359 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 FBXO45P0C2W1 286 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 DRD2P14416 443 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 NTSP30990 170 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 TIA1P31483 386 aaKnown RBP eCLIP8.43□□□□□ -1.06
HDAC6-232ENST00000489053 GSTM5P46439 218 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 DNASE1L1P49184 302 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 MAN2A2P49641 1150 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 SLC37A1P57057 533 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 HMGCS1Q01581 520 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 GALNT1Q10472 559 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-232ENST00000489053 SLC10A1Q14973 349 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 EBPQ15125 230 aaKnown RBP8.43□□□□□ -1.06
HDAC6-232ENST00000489053 RPS6KA2Q15349 733 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 TOMM20Q15388 145 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 TBCELQ5QJ74 424 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 LIPMQ5VYY2 423 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 TMEM198Q66K66 360 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 TMEM211Q6ICI0 200 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 XKRXQ6PP77 449 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 DGAT2L6Q6ZPD8 337 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 PACS2Q86VP3 889 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 SLC34A3Q8N130 599 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 FAM109AQ8N4B1 249 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 FAM57AQ8TBR7 257 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 CA5BP1Q8WTZ4 195 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 EXOSC8Q96B26 276 aaKnown RBP8.43□□□□□ -1.06
HDAC6-232ENST00000489053 DTNBP1Q96EV8 351 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 APOPT1Q96IL0 206 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 KCNA7Q96RP8 456 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 EBPLQ9BY08 206 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 TTTY12Q9BZ98 90 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms