RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 SEC22BO75396 215 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 RSL1D1O76021 490 aaKnown RBP13.23□□□□□ -0.29
BRCA1-218ENST00000489037 OR6B1O95007 311 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 UNC5CO95185 931 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 NEFHP12036 1026 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 ZNF24P17028 368 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 SERPINB5P36952 375 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 FEN1P39748 380 aaKnown RBP13.23□□□□□ -0.29
BRCA1-218ENST00000489037 MEOX1P50221 254 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 CASP6P55212 293 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 SLC37A1P57057 533 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 RAE1P78406 368 aaKnown RBP13.23□□□□□ -0.29
BRCA1-218ENST00000489037 ZNF763Q0D2J5 394 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 FAM219BQ5XKK7 198 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 CLEC6AQ6EIG7 209 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 GALNT18Q6P9A2 607 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 NUDCD3Q8IVD9 361 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 SULF2Q8IWU5 870 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 C9orf40Q8IXQ3 194 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 DND1Q8IYX4 353 aaKnown RBP13.23□□□□□ -0.29
BRCA1-218ENST00000489037 TAGAPQ8N103 731 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 LRRC25Q8N386 305 aaPredicted RBP13.23□□□□□ -0.29
BRCA1-218ENST00000489037 PSD4Q8NDX1 1056 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 OR7G1Q8NGA0 311 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 CDC26Q8NHZ8 85 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 EBPLQ9BY08 206 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 STMN4Q9H169 189 aaPredicted RBP13.23□□□□□ -0.29
BRCA1-218ENST00000489037 CES1P1Q9UKY3 287 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 SLC5A6Q9Y289 635 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 WBP11Q9Y2W2 641 aaKnown RBP13.23□□□□□ -0.29
BRCA1-218ENST00000489037 LRRK2Q5S007 2527 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 SPTBN1Q01082 2364 aaKnown RBP13.22□□□□□ -0.29
BRCA1-218ENST00000489037 CLEC18AA5D8T8 446 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 NPIPA5E9PKD4 350 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 P04436 131 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 ATP1B1P05026 303 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 MST1P26927 711 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 SSTR4P31391 388 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 TDGF1P3P51864 188 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 PER3P56645 1201 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 NRG3P56975 720 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 C2orf80Q0P641 193 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.22□□□□□ -0.29
BRCA1-218ENST00000489037 CLEC18BQ6UXF7 455 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 LRIG3Q6UXM1 1119 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 MDGA2Q7Z553 956 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 ZNF227Q86WZ6 799 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 CLYBLQ8N0X4 340 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 VWA5B2Q8N398 1253 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 CPSF7Q8N684 471 aaKnown RBP13.22□□□□□ -0.29
BRCA1-218ENST00000489037 GOLM1Q8NBJ4 401 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 CLEC18CQ8NCF0 446 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 SSC4DQ8WTU2 575 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 TP53INP1Q96A56 240 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 FRMD6Q96NE9 622 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 ZIM3Q96PE6 472 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 MECRQ9BV79 373 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 WWTR1Q9GZV5 400 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 OR10A5Q9H207 317 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 SSU72Q9NP77 194 aaKnown RBP13.22□□□□□ -0.29
BRCA1-218ENST00000489037 KCNK9Q9NPC2 374 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 MIEF1Q9NQG6 463 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 SACM1LQ9NTJ5 587 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 BCAP29Q9UHQ4 241 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 NPIPA1Q9UND3 350 aa13.22□□□□□ -0.29
BRCA1-218ENST00000489037 A0A1B0GUH1 482 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 A0A1W2PS29 197 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 ACOT7O00154 380 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 TFECO14948 347 aaPredicted RBP13.21□□□□□ -0.29
BRCA1-218ENST00000489037 TM9SF1O15321 606 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 TYROBPO43914 113 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 BCAS2O75934 225 aaPredicted RBP13.21□□□□□ -0.29
BRCA1-218ENST00000489037 BPGMP07738 259 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 FGF4P08620 206 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 CREB1P16220 341 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 MPIP34949 423 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 NR0B1P51843 470 aaKnown RBP13.21□□□□□ -0.29
BRCA1-218ENST00000489037 KCNK10P57789 538 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 PLGLB1Q02325 96 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 SRSF1Q07955 248 aaKnown RBP eCLIP13.21□□□□□ -0.29
BRCA1-218ENST00000489037 FUT7Q11130 342 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 MAP4K2Q12851 820 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 EBPQ15125 230 aaKnown RBP13.21□□□□□ -0.29
BRCA1-218ENST00000489037 ZNF750Q32MQ0 723 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 ARL13AQ5H913 290 aaPredicted RBP13.21□□□□□ -0.29
BRCA1-218ENST00000489037 NOXRED1Q6NXP6 359 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 GK5Q6ZS86 529 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 EXOC3L1Q86VI1 746 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 DDIASQ8IXT1 998 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 MMP21Q8N119 569 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 EXOSC8Q96B26 276 aaKnown RBP13.21□□□□□ -0.29
BRCA1-218ENST00000489037 MAGED4Q96JG8 741 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 GPR137Q96N19 417 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 BBS4Q96RK4 519 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 LRTM1Q9HBL6 345 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 C1orf109Q9NX04 203 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 EHD3Q9NZN3 535 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 HEY2Q9UBP5 337 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 TRAF6Q9Y4K3 522 aa13.21□□□□□ -0.29
BRCA1-218ENST00000489037 POLR3HQ9Y535 204 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms