RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 ISM1B1AKI9 464 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 J3KTA2 159 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 CHP2O43745 196 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 PCDH7O60245 1069 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 CXCL14O95715 111 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 IFNA7P01567 189 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 LAMP1P11279 417 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 SERPINA4P29622 427 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 WEE1P30291 646 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 CCR2P41597 374 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 CASP9P55211 416 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 RIPPLY1Q0D2K3 151 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 RIN1Q13671 783 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 POU4F3Q15319 338 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 GARNL3Q5VVW2 1013 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 FRG2Q64ET8 278 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 GPR139Q6DWJ6 353 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 CMTM8Q8IZV2 173 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 PLA2G15Q8NCC3 412 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 SORCS2Q96PQ0 1159 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 FRG2BQ96QU4 278 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 DUSP26Q9BV47 211 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 SLC12A9Q9BXP2 914 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 MED28Q9H204 178 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 HEXA-AS1Q9H8Q6 139 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 SLC28A3Q9HAS3 691 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 ZC4H2Q9NQZ6 224 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.5□□□□□ -0.25
RER1-207ENST00000488353 DNAJC27Q9NZQ0 273 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 NCKAP1Q9Y2A7 1128 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 GSTK1Q9Y2Q3 226 aa13.5□□□□□ -0.25
RER1-207ENST00000488353 DNMT3AQ9Y6K1 912 aaPredicted RBP13.5□□□□□ -0.25
RER1-207ENST00000488353 PRAMEF25A6NGN4 478 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 QSOX1O00391 747 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 OR56A5P0C7T3 313 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 CBSLP0DN79 551 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 CTSAP10619 480 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 HK1P19367 917 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 CBSP35520 551 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 PPM1AP35813 382 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 XCR1P46094 333 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 EVX1P49640 407 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 ALDH6A1Q02252 535 aaKnown RBP13.49□□□□□ -0.25
RER1-207ENST00000488353 ZNF284Q2VY69 593 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 PLK5Q496M5 336 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 LRRC70Q7Z2Q7 622 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 LAPTM4BQ86VI4 370 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 ADGRG3Q86Y34 549 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 OR52P1PQ8NH57 321 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 ASB11Q8WXH4 323 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 C1GALT1C1Q96EU7 318 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 FCRL1Q96LA6 429 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 SLC46A2Q9BY10 475 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 C11orf16Q9NQ32 467 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 MALT1Q9UDY8 824 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 BTNL2Q9UIR0 455 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 KIAA1671Q9BY89 1806 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 DSPPQ9NZW4 1301 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 C5orf42Q9H799 3197 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 A8MUA0 341 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 LEFTY2O00292 366 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 RRASP10301 218 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 ZNF91Q05481 1191 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 FOXD4Q12950 439 aaPredicted RBP13.49□□□□□ -0.25
RER1-207ENST00000488353 FCN2Q15485 313 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 NDUFAF5Q5TEU4 345 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 PAQR6Q6TCH4 344 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 ARSKQ6UWY0 536 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 TMEM107Q6UX40 140 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 TPRG1Q6ZUI0 275 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 HTR3DQ70Z44 454 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 GPAT4Q86UL3 456 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 CBARPQ8N350 705 aaPredicted RBP13.49□□□□□ -0.25
RER1-207ENST00000488353 OR2AP1Q8NGE2 309 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 GEMIN6Q8WXD5 167 aaKnown RBP13.49□□□□□ -0.25
RER1-207ENST00000488353 ZNF578Q96N58 590 aaPredicted RBP13.49□□□□□ -0.25
RER1-207ENST00000488353 CLEC4MQ9H2X3 399 aaPredicted RBP13.49□□□□□ -0.25
RER1-207ENST00000488353 NMNAT1Q9HAN9 279 aaPredicted RBP13.49□□□□□ -0.25
RER1-207ENST00000488353 ZFP64Q9NPA5 681 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 DNAJC11Q9NVH1 559 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 NDOR1Q9UHB4 597 aa13.49□□□□□ -0.25
RER1-207ENST00000488353 SMIM30A4D0T7 59 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 STK25O00506 426 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 SOCS5O75159 536 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 HOXD4P09016 255 aaPredicted RBP13.48□□□□□ -0.25
RER1-207ENST00000488353 LINC00271P0C7V0 271 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 HLA-FP30511 346 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 CRATP43155 626 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 SLC6A12P48065 614 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 IRF8Q02556 426 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 GANABQ14697 944 aaKnown RBP13.48□□□□□ -0.25
RER1-207ENST00000488353 ZNF57Q68EA5 555 aaPredicted RBP13.48□□□□□ -0.25
RER1-207ENST00000488353 ADNP2Q6IQ32 1131 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 FAM92BQ6ZTR7 304 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 L3MBTL4Q8NA19 623 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 KREMEN2Q8NCW0 462 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.48□□□□□ -0.252e-11■□□□□ 9.9
RER1-207ENST00000488353 FOXJ1Q92949 421 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 TCEAL4Q96EI5 215 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 TSSK6Q9BXA6 273 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms