RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 POU4F3Q15319 338 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 PCBP2Q15366 365 aaKnown RBP eCLIP17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 NHSL2Q5HYW2 709 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 DCST1Q5T197 706 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 FNDC7Q5VTL7 733 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 CLEC9AQ6UXN8 241 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 ZCCHC7Q8N3Z6 543 aaKnown RBP17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 ZNF441Q8N8Z8 693 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 MBD3L2Q8NHZ7 208 aaPredicted RBP17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 SPPL2AQ8TCT8 520 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 RIT1Q92963 219 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 TSPAN17Q96FV3 270 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 RILPQ96NA2 401 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 YIPF4Q9BSR8 244 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 UGT2B28Q9BY64 529 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 RNF112Q9ULX5 631 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 C15orf41Q9Y2V0 281 aa17.79■□□□□ 0.44
SMPDL3A-202ENST00000487215 A0A1W2PPR1 153 aa17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 E7ESA3 106 aa17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 SEC31AO94979 1220 aaKnown RBP17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 SNX4O95219 450 aa17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 GPR75O95800 540 aa17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 HRGP04196 525 aa17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 BMP7P18075 431 aa17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 TLX1P31314 330 aaPredicted RBP17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 OPRM1P35372 400 aa17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 BUD31P41223 144 aaPredicted RBP17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 RPL21P46778 160 aaKnown RBP17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 MASP1P48740 699 aa17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 ILF2Q12905 390 aaKnown RBP17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 EIPR1Q53HC9 387 aa17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 CAPN12Q6ZSI9 719 aa17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 HUS1BQ8NHY5 278 aa17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 RGMAQ96B86 450 aa17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 WDYHV1Q96HA8 205 aa17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 GNRHR2Q96P88 292 aa17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 ANGPTL4Q9BY76 406 aa17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 BEX4Q9NWD9 120 aaPredicted RBP17.78■□□□□ 0.44
SMPDL3A-202ENST00000487215 C2orf92A0A1B0GVN3 265 aa17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 GLOD5A6NK44 160 aa17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 CAPN14A8MX76 684 aa17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 CXorf49A8MYA2 514 aaPredicted RBP17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 IL18BPO95998 194 aa17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 STMN1P16949 149 aa17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 SSTR4P31391 388 aa17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 GMPRP36959 345 aa17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 NKX6-1P78426 367 aaPredicted RBP17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 DR1Q01658 176 aa17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 GRHL2Q6ISB3 625 aa17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 KLHL7Q8IXQ5 586 aa17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 C9orf106Q8NAJ2 232 aa17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 TP53INP1Q96A56 240 aa17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 ARSGQ96EG1 525 aa17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 UBXN10Q96LJ8 280 aa17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 GPR22Q99680 433 aa17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 ZNF717Q9BY31 904 aaPredicted RBP17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 SNX15Q9NRS6 342 aa17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 TEX10Q9NXF1 929 aaPredicted RBP17.77■□□□□ 0.44
SMPDL3A-202ENST00000487215 A0A1W2PR48 441 aa17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 HEXAP06865 529 aa17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 GALNSP34059 522 aa17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 PCDH1Q08174 1060 aa17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 TOMM20Q15388 145 aa17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 ZKSCAN8Q15776 578 aaPredicted RBP17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 WIPI1Q5MNZ9 446 aaPredicted RBP17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 MRM1Q6IN84 353 aaKnown RBP17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 PACS2Q86VP3 889 aa17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 ZBED8Q8IZ13 594 aa17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 ABTB1Q969K4 478 aaPredicted RBP17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 SECISBP2Q96T21 854 aaKnown RBP17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 MTERF1Q99551 399 aaKnown RBP17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 CENPKQ9BS16 269 aa17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 ALG9Q9H6U8 611 aa17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 CALHM2Q9HA72 323 aa17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 NUDT4Q9NZJ9 180 aa17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 OPTCQ9UBM4 332 aa17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 ADGRE2Q9UHX3 823 aa17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 ASB4Q9Y574 426 aa17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 NPFFR2Q9Y5X5 522 aa17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 NSD1Q96L73 2696 aaPredicted RBP17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 NINQ8N4C6 2090 aa17.76■□□□□ 0.43
SMPDL3A-202ENST00000487215 A0A0A6YYD5 115 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 A0A1W2PS29 197 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 K7EPI3 171 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 TMPRSS11DO60235 418 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 EEDO75530 441 aaKnown RBP17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 SLC35E2BP0CK96 405 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 SLC35E2P0CK97 266 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 TMIGD3P0DMS9 266 aaPredicted RBP17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 NR2F6P10588 404 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 SOX18P35713 384 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 PIK3CBP42338 1070 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 CASP3P42574 277 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 TMED10P49755 219 aaKnown RBP17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 NAGLUP54802 743 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 FOXF2Q12947 444 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 SHEQ5VZ18 495 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 TAOK1Q7L7X3 1001 aa17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 CXorf67Q86X51 503 aaPredicted RBP17.75■□□□□ 0.43
SMPDL3A-202ENST00000487215 UBTD2Q8WUN7 234 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms