RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 KDELC1Q6UW63 502 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 LRRC25Q8N386 305 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-210ENST00000487017 ITPKCQ96DU7 683 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 TP63Q9H3D4 680 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-210ENST00000487017 ABCD2Q9UBJ2 740 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 ZNF860A6NHJ4 632 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 CCNOP22674 350 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 KEAP1Q14145 624 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 APCDD1Q8J025 514 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 OR5J2Q8NH18 312 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 C16orf78Q8WTQ4 265 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 CASTOR1Q8WTX7 329 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 ASB12Q8WXK4 309 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 MAL2Q969L2 176 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 TMEM19Q96HH6 336 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 TMEM41AQ96HV5 264 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 MAELQ96JY0 434 aaKnown RBP15.7■□□□□ 0.1
COL7A1-210ENST00000487017 HS6ST2Q96MM7 605 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 AGPAT4Q9NRZ5 378 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 NOX1Q9Y5S8 564 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 AGXTP21549 392 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 SPINT3P49223 89 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 OR4C11Q6IEV9 310 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 RBM12BQ8IXT5 1001 aaKnown RBP15.7■□□□□ 0.1
COL7A1-210ENST00000487017 OR56A3Q8NH54 315 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 TFAP2CQ92754 450 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 RBP7Q96R05 134 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 OR2M4Q96R27 311 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 CMKLR1Q99788 373 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 ABCG5Q9H222 651 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 CD93Q9NPY3 652 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 PRODH2Q9UF12 536 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 PLCL2Q9UPR0 1127 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 SPO11Q9Y5K1 396 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 FUOMA2VDF0 154 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 C2orf74A8MZ97 194 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 GTF2F2P13984 249 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 PYCR1P32322 319 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 NAA10P41227 235 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-210ENST00000487017 GSTM4Q03013 218 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 ZNF33BQ06732 778 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 NFE2L1Q14494 772 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 RGNQ15493 299 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 PHF19Q5T6S3 580 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 TMEM53Q6P2H8 277 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 TMEM40Q8WWA1 233 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 HTR3EA5X5Y0 456 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 SOX1O00570 391 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-210ENST00000487017 PPM1BO75688 479 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 IL4RP24394 825 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 OXTRP30559 389 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 ACTA2P62736 377 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 ACTG2P63267 376 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 TMEM35AQ53FP2 167 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 GRHL2Q6ISB3 625 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 TIGD4Q8IY51 512 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 ACBD7Q8N6N7 88 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 GALNT6Q8NCL4 622 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 COQ8AQ8NI60 647 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 PNPLA2Q96AD5 504 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 SH3YL1Q96HL8 342 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-210ENST00000487017 CPNE5Q9HCH3 593 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 MYH13Q9UKX3 1938 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 RGPD1P0DJD0 1748 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 FEZF1A0PJY2 475 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 WASHC1A8K0Z3 465 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 WASH3PC4AMC7 463 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 CYP17A1P05093 508 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 PFKLP17858 780 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 S1PR1P21453 382 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 CNR2P34972 360 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 ADH7P40394 386 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 LRP8Q14114 963 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 MICAQ29983 383 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 ITPRIPL2Q3MIP1 535 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 WASH2PQ6VEQ5 465 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 GKN2Q86XP6 184 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 ADGRG5Q8IZF4 528 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 TESCQ96BS2 214 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 RHBDF1Q96CC6 855 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 MVB12BQ9H7P6 319 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 WDR6Q9NNW5 1121 aaKnown RBP15.69■□□□□ 0.1
COL7A1-210ENST00000487017 PRTFDC1Q9NRG1 225 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 ENPP4Q9Y6X5 453 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 RGPD2P0DJD1 1756 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 A0A1W2PPK0 400 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 BCAS1O75363 584 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-210ENST00000487017 TRAPPC6AO75865 159 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 RPS17P08708 135 aaKnown RBP15.69■□□□□ 0.1
COL7A1-210ENST00000487017 TYRP1P17643 537 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 DNASE1P24855 282 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 CD40LGP29965 261 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 DHPSP49366 369 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-210ENST00000487017 GAS6Q14393 721 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 NDNFQ8TB73 568 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 ECHDC3Q96DC8 303 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 FAM83CQ9BQN1 747 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-210ENST00000487017 CSTAP01040 98 aa15.69■□□□□ 0.1
COL7A1-210ENST00000487017 SPARCP09486 303 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms