RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 TRNT1Q96Q11 434 aaKnown RBP11.65□□□□□ -0.54
PTCD2-204ENST00000486995 KCNK12Q9HB15 430 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 CPNE5Q9HCH3 593 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 HHATLQ9HCP6 504 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 SLC35C2Q9NQQ7 365 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 ZNF229Q9UJW7 825 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 PEX16Q9Y5Y5 336 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 A0A1W2PRQ8 180 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 GLOD5A6NK44 160 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 SLITRK5O94991 958 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 STATHP02808 62 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 NR2F1P10589 423 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 CKMT1AP12532 417 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 GTF2E2P29084 291 aaKnown RBP11.65□□□□□ -0.54
PTCD2-204ENST00000486995 GPC1P35052 558 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 TRIM23P36406 574 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 SSR2P43308 183 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 MAGEA8P43361 318 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 EIF2B2P49770 351 aaKnown RBP11.65□□□□□ -0.54
PTCD2-204ENST00000486995 SMIM11AP58511 58 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 NCF4Q15080 339 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 PDGFRLQ15198 375 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 MEDAGQ5VYS4 303 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 PODNL1Q6PEZ8 512 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 CACTIN-AS1Q8N1I8 211 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 TCEANCQ8N8B7 351 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 OR8J1Q8NGP2 316 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 KLHL6Q8WZ60 621 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 OTUB1Q96FW1 271 aaPredicted RBP11.65□□□□□ -0.54
PTCD2-204ENST00000486995 TMEM80Q96HE8 168 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 CAMK1GQ96NX5 476 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 MACROD1Q9BQ69 325 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 SACM1LQ9NTJ5 587 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 ZCCHC3Q9NUD5 404 aaKnown RBP11.65□□□□□ -0.54
PTCD2-204ENST00000486995 TRPC4Q9UBN4 977 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 SERGEFQ9UGK8 458 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 RWDD3Q9Y3V2 267 aa11.65□□□□□ -0.54
PTCD2-204ENST00000486995 C4orf51C9J302 202 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 MAN2B1O00754 1011 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 UGT2B17O75795 530 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 TNNI3P19429 210 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 PTGER1P34995 402 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 BCL6P41182 706 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 ETV6P41212 452 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 NCBP2P52298 156 aaKnown RBP eCLIP11.64□□□□□ -0.55
PTCD2-204ENST00000486995 LSM11P83369 360 aaKnown RBP eCLIP11.64□□□□□ -0.55
PTCD2-204ENST00000486995 DMPKQ09013 629 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 HYAL2Q12891 473 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 FGL2Q14314 439 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 GPR19Q15760 415 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 ZIC1Q15915 447 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 CASP12Q6UXS9 341 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 ZER1Q7Z7L7 766 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 POC5Q8NA72 575 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 HTRA1Q92743 480 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 TRPM6Q9BX84 2022 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 OSGEPL1Q9H4B0 414 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 WDR26Q9H7D7 661 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 MAN2C1Q9NTJ4 1040 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 EHD3Q9NZN3 535 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 PAIP2BQ9ULR5 123 aaKnown RBP11.64□□□□□ -0.55
PTCD2-204ENST00000486995 NUMA1Q14980 2115 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 HEATR5BQ9P2D3 2071 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 TMEM221A6NGB7 291 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 PGRMC2O15173 223 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 TPST2O60704 377 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 CSO75390 466 aaKnown RBP11.64□□□□□ -0.55
PTCD2-204ENST00000486995 PAK4O96013 591 aaPredicted RBP11.64□□□□□ -0.55
PTCD2-204ENST00000486995 HOXB3P14651 431 aaPredicted RBP11.64□□□□□ -0.55
PTCD2-204ENST00000486995 SOX6P35712 828 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 SOX3P41225 446 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 WASP42768 502 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 RAB28P51157 221 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 ZNF91Q05481 1191 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 FUT5Q11128 374 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 IRF4Q15306 451 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 OCLNQ16625 522 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 MFSD4BQ5TF39 518 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 HMGN2P46Q86SG4 172 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 SLC34A3Q8N130 599 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 IQCF1Q8N6M8 205 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 OR6T1Q8NGN1 323 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 HPS1Q92902 700 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 CHFRQ96EP1 664 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 IMP3Q9NV31 184 aaKnown RBP11.64□□□□□ -0.55
PTCD2-204ENST00000486995 ANKMY1Q9P2S6 941 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 MKLN1Q9UL63 735 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 CFL2Q9Y281 166 aa11.64□□□□□ -0.55
PTCD2-204ENST00000486995 CAB39Q9Y376 341 aaPredicted RBP11.64□□□□□ -0.55
PTCD2-204ENST00000486995 RPL36Q9Y3U8 105 aaKnown RBP11.64□□□□□ -0.55
PTCD2-204ENST00000486995 GPR89AB7ZAQ6 455 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 CTDSP2O14595 271 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 HAT1O14929 419 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 NME6O75414 186 aaPredicted RBP11.63□□□□□ -0.55
PTCD2-204ENST00000486995 KAT7O95251 611 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 MED26O95402 600 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 CHRM4P08173 479 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 GPR89BP0CG08 455 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 ATXN8OSP0DMR3 200 aa11.63□□□□□ -0.55
PTCD2-204ENST00000486995 FCARP24071 287 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms