RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 GTSCR1Q86UQ5 136 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 ITIH5Q86UX2 942 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 SLC22A16Q86VW1 577 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 FAM131BQ86XD5 332 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 CATSPER3Q86XQ3 398 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 RNF130Q86XS8 419 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 ERC1Q8IUD2 1116 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 LRRC15Q8TF66 581 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 TMEM37Q8WXS4 190 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 TAF4BQ92750 862 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 C11orf52Q96A22 123 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 TMEM45BQ96B21 275 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 TBC1D31Q96DN5 1066 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 MOCOSQ96EN8 888 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 JPH2Q9BR39 696 aaPredicted RBP3.78□□□□□ -1.8
SMC4-218ENST00000486711 DCTPP1Q9H773 170 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 DEPPQ9NTK1 212 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 HPF1Q9NWY4 346 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 THYN1Q9P016 225 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 BCAP29Q9UHQ4 241 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 MUTYHQ9UIF7 546 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 NIP7Q9Y221 180 aaKnown RBP eCLIP3.78□□□□□ -1.8
SMC4-218ENST00000486711 PLEKHA6Q9Y2H5 1048 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 CLCA3PQ9Y6N3 262 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 AFF2P51816 1311 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 BCLAF3A2AJT9 711 aaKnown RBP3.77□□□□□ -1.81
SMC4-218ENST00000486711 C19orf81C9J6K1 198 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 H7C423 109 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 POP4O95707 220 aaKnown RBP3.77□□□□□ -1.81
SMC4-218ENST00000486711 PRDX6P30041 224 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 CAMLGP49069 296 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 NDST1P52848 882 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 RPS4XP62701 263 aaKnown RBP3.77□□□□□ -1.81
SMC4-218ENST00000486711 GSTO1P78417 241 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 ELAVL2Q12926 359 aaKnown RBP3.77□□□□□ -1.81
SMC4-218ENST00000486711 EMC2Q15006 297 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 KARSQ15046 597 aaKnown RBP3.77□□□□□ -1.81
SMC4-218ENST00000486711 CLPPQ16740 277 aaPredicted RBP3.77□□□□□ -1.81
SMC4-218ENST00000486711 HAGHQ16775 308 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 AGAP7PQ5VUJ5 663 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 GET4Q7L5D6 327 aaPredicted RBP3.77□□□□□ -1.81
SMC4-218ENST00000486711 OR1K1Q8NGR3 316 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 CCDC110Q8TBZ0 833 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 NPRL2Q8WTW4 380 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 FCGR1BQ92637 280 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 RCHY1Q96PM5 261 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 IWS1Q96ST2 819 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 FAM124BQ9H5Z6 455 aaPredicted RBP3.77□□□□□ -1.81
SMC4-218ENST00000486711 NT5DC2Q9H857 520 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 LHX3Q9UBR4 397 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 ASIC3Q9UHC3 531 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 MGAT4AQ9UM21 535 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 SLC9A8Q9Y2E8 581 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 SLC6A5Q9Y345 797 aa3.77□□□□□ -1.81
SMC4-218ENST00000486711 TRGV8A0A0C4DH27 118 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 ARHGEF33A8MVX0 844 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 A8MXK9 166 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 SOCS3O14543 225 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 BUB1O43683 1085 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 SNAP91O60641 907 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 CRLF1O75462 422 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 TRIM16O95361 564 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 SELEP16581 610 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 CHRNA3P32297 505 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 SLC6A8P48029 635 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 NPY2RP49146 381 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 TKTL1P51854 596 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 NDUFV3P56181 108 aaKnown RBP3.76□□□□□ -1.81
SMC4-218ENST00000486711 AGKQ53H12 422 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 TEX35Q5T0J7 233 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 FAM159AQ6UWV7 190 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 TMEM26Q6ZUK4 368 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 CATSPER4Q7RTX7 472 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 GPR142Q7Z601 462 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 CARM1Q86X55 608 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 PYROXD2Q8N2H3 581 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 RNF148Q8N7C7 305 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 SAMD12Q8N8I0 201 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 RELL2Q8NC24 303 aaPredicted RBP3.76□□□□□ -1.81
SMC4-218ENST00000486711 OR56B1Q8NGI3 324 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 OR1B1Q8NGR6 318 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 P3H4Q92791 437 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 PNPLA2Q96AD5 504 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 C18orf12Q96KH6 178 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 DEFB118Q96PH6 123 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 ATF6BQ99941 703 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 CHCHD5Q9BSY4 110 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 LRRC61Q9BV99 259 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 NMNAT2Q9BZQ4 307 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 RWDD1Q9H446 243 aaPredicted RBP3.76□□□□□ -1.81
SMC4-218ENST00000486711 ELL3Q9HB65 397 aaPredicted RBP3.76□□□□□ -1.81
SMC4-218ENST00000486711 NGBQ9NPG2 151 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 SOHLH2Q9NX45 425 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 CNOT2Q9NZN8 540 aaKnown RBP3.76□□□□□ -1.81
SMC4-218ENST00000486711 THAP10Q9P2Z0 257 aaPredicted RBP3.76□□□□□ -1.81
SMC4-218ENST00000486711 TUBGCP4Q9UGJ1 667 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 NPC1L1Q9UHC9 1359 aa3.76□□□□□ -1.81
SMC4-218ENST00000486711 IGLV4-3A0A075B6K6 122 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 TRBV5-4A0A0C4DH59 114 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 A0A0J9YWU9 116 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms