RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 FRMD7Q6ZUT3 714 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 SLC22A16Q86VW1 577 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 SPPL2CQ8IUH8 684 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 DND1Q8IYX4 353 aaKnown RBP11.92□□□□□ -0.5
CHMP3-208ENST00000486404 VWA5B2Q8N398 1253 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 RIBC1Q8N443 379 aaPredicted RBP11.92□□□□□ -0.5
CHMP3-208ENST00000486404 SLC15A4Q8N697 577 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 ZFP62Q8NB50 900 aaPredicted RBP11.92□□□□□ -0.5
CHMP3-208ENST00000486404 OR2M7Q8NG81 312 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 CDC26Q8NHZ8 85 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 UCN3Q969E3 161 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 SPACA9Q96E40 222 aaPredicted RBP11.92□□□□□ -0.5
CHMP3-208ENST00000486404 FAM173AQ9BQD7 235 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 ACPTQ9BZG2 426 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 BRINP2Q9C0B6 783 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 CXorf21Q9HAI6 301 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 GIMAP4Q9NUV9 329 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 MCM8Q9UJA3 840 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 PSME2Q9UL46 239 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 PCDHA9Q9Y5H5 950 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 ZNF780BQ9Y6R6 833 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 MAST4O15021 2626 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 NAV2Q8IVL1 2488 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 A0A0G2JMM0 328 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 C2orf92A0A1B0GVN3 265 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 A0A1W2PPB8 328 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 A0A1W2PRS3 328 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 A0A1W2PS29 197 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 KIR3DP1A8MWS1 328 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 PRRG2O14669 202 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 CCL3P10147 92 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 CPA3P15088 417 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 PORP16435 677 aaPredicted RBP11.91□□□□□ -0.5
CHMP3-208ENST00000486404 CSNK2A2P19784 350 aaPredicted RBP11.91□□□□□ -0.5
CHMP3-208ENST00000486404 SERPINB3P29508 390 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 SSTR4P31391 388 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 TIA1P31483 386 aaKnown RBP eCLIP11.91□□□□□ -0.5
CHMP3-208ENST00000486404 TMED10P49755 219 aaKnown RBP11.91□□□□□ -0.5
CHMP3-208ENST00000486404 NAGLUP54802 743 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 NRG3P56975 720 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 PPIAP62937 165 aaKnown RBP11.91□□□□□ -0.5
CHMP3-208ENST00000486404 KCNJ2P63252 427 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 HMGCS1Q01581 520 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 PIGGQ5H8A4 983 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 EMBQ6PCB8 327 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 PAOXQ6QHF9 649 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 RGS9BPQ6ZS82 235 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 LRRC25Q8N386 305 aaPredicted RBP11.91□□□□□ -0.5
CHMP3-208ENST00000486404 OR2W6PQ8NHA6 318 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 CCDC120Q96HB5 630 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 APOPT1Q96IL0 206 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 EBPLQ9BY08 206 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 TTTY12Q9BZ98 90 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 DEPPQ9NTK1 212 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 SENP1Q9P0U3 644 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.91□□□□□ -0.5
CHMP3-208ENST00000486404 ENTPD4Q9Y227 616 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 TIMM22Q9Y584 194 aa11.91□□□□□ -0.5
CHMP3-208ENST00000486404 V9GYY5 206 aaPredicted RBP11.91□□□□□ -0.5
CHMP3-208ENST00000486404 ZNF407Q9C0G0 2248 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 CAPN14A8MX76 684 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 TPOP07202 933 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 IL3P08700 152 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 NUDT17P0C025 328 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 CHN1P15882 459 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 FEN1P39748 380 aaKnown RBP11.9□□□□□ -0.5
CHMP3-208ENST00000486404 DNASE1L1P49184 302 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 SMSP52788 366 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 DNAJB13P59910 316 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 BTKQ06187 659 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 LIPMQ5VYY2 423 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 SCIMPQ6UWF3 145 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 CD163Q86VB7 1156 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 SRRM1Q8IYB3 904 aaKnown RBP11.9□□□□□ -0.5
CHMP3-208ENST00000486404 MMP21Q8N119 569 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 OR7G1Q8NGA0 311 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 C16orf52Q8NHV5 167 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 TM4SF18Q96CE8 201 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 OR10A5Q9H207 317 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 OXSMQ9NWU1 459 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 BCAP29Q9UHQ4 241 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 UTS2RQ9UKP6 389 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 BOKQ9UMX3 212 aaPredicted RBP11.9□□□□□ -0.5
CHMP3-208ENST00000486404 CFL2Q9Y281 166 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 DLGAP4Q9Y2H0 992 aa11.9□□□□□ -0.5
CHMP3-208ENST00000486404 DNAJC13O75165 2243 aa11.9□□□□□ -0.51
CHMP3-208ENST00000486404 NCOA6Q14686 2063 aaPredicted RBP11.9□□□□□ -0.51
CHMP3-208ENST00000486404 A0A1B0GTH9 108 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 PINLYPA6NC86 204 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 PRSS44E7EML9 344 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 TP53I11O14683 189 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 ZNF354AO60765 605 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-208ENST00000486404 WISP2O76076 250 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 NADKO95544 446 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-208ENST00000486404 CLPSP04118 112 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 ATP1B1P05026 303 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 ANXA4P09525 319 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-208ENST00000486404 FBXO45P0C2W1 286 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 CT62P0C5K7 136 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 CNR1P21554 472 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms