RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 BAIAP2L1Q9UHR4 511 aa15.94■□□□□ 0.14
VIM-205ENST00000485947 A0A0A6YYD5 115 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 SYNDIG1LA6NDD5 238 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 SGK494L7N484 410 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 MASP2O00187 686 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 NR5A2O00482 541 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 CFLARO15519 480 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 GUCY1B2O75343 617 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 IL6P05231 212 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 SMIM10L1P0DMW3 83 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 DDX5P17844 614 aaKnown RBP15.93■□□□□ 0.14
VIM-205ENST00000485947 HIST1H1TP22492 207 aaPredicted RBP15.93■□□□□ 0.14
VIM-205ENST00000485947 IL12AP29459 219 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 HPCAL1P37235 193 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 MAPK12P53778 367 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 PLA2G16P53816 162 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 NCALDP61601 193 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 ZNF169Q14929 603 aaPredicted RBP15.93■□□□□ 0.14
VIM-205ENST00000485947 INAQ16352 499 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 SPRED3Q2MJR0 410 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 MINDY4Q4G0A6 757 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 FHL5Q5TD97 284 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 MSANTD1Q6ZTZ1 278 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 PRSS41Q7RTY9 318 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 R3HCC1LQ7Z5L2 792 aaKnown RBP15.93■□□□□ 0.14
VIM-205ENST00000485947 PDSS2Q86YH6 399 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.93■□□□□ 0.14
VIM-205ENST00000485947 ZCCHC10Q8TBK6 192 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 UTP15Q8TED0 518 aaKnown RBP15.93■□□□□ 0.14
VIM-205ENST00000485947 C16orf78Q8WTQ4 265 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 TBC1D20Q96BZ9 403 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 SMIM10Q96HG1 83 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 ZBTB20Q9HC78 741 aaPredicted RBP15.93■□□□□ 0.14
VIM-205ENST00000485947 PRDM7Q9NQW5 492 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 LYARQ9NX58 379 aaKnown RBP15.93■□□□□ 0.14
VIM-205ENST00000485947 NDE1Q9NXR1 346 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 NDUFAF1Q9Y375 327 aa15.93■□□□□ 0.14
VIM-205ENST00000485947 A0A1W2PP18 115 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 CCDC154A6NI56 674 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 RTCAO00442 366 aaKnown RBP15.92■□□□□ 0.14
VIM-205ENST00000485947 ANGPT2O15123 496 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 SCAMP2O15127 329 aaKnown RBP15.92■□□□□ 0.14
VIM-205ENST00000485947 RDH16O75452 317 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 EEDO75530 441 aaKnown RBP15.92■□□□□ 0.14
VIM-205ENST00000485947 STATHP02808 62 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 FHP07954 510 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 ZNF888P0CJ79 500 aaPredicted RBP15.92■□□□□ 0.14
VIM-205ENST00000485947 CAPN3P20807 821 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 ATP5A1P25705 553 aaKnown RBP15.92■□□□□ 0.14
VIM-205ENST00000485947 MTTPP55157 894 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 SRSF11Q05519 484 aaKnown RBP15.92■□□□□ 0.14
VIM-205ENST00000485947 EEF1A2Q05639 463 aaKnown RBP15.92■□□□□ 0.14
VIM-205ENST00000485947 MMEL1Q495T6 779 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 MFSD4BQ5TF39 518 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 FAM71E1Q6IPT2 247 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 CAMKMTQ7Z624 323 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 TMEM132CQ8N3T6 1108 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 CISD2Q8N5K1 135 aaKnown RBP15.92■□□□□ 0.14
VIM-205ENST00000485947 PCYOX1LQ8NBM8 494 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 CLHC1Q8NHS4 586 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 SLC7A6OSQ96CW6 309 aaPredicted RBP15.92■□□□□ 0.14
VIM-205ENST00000485947 EGLN2Q96KS0 407 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 PRPF18Q99633 342 aaKnown RBP15.92■□□□□ 0.14
VIM-205ENST00000485947 MACROD1Q9BQ69 325 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 EFCAB1Q9HAE3 211 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 SLC52A3Q9NQ40 469 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.92■□□□□ 0.142e-33■■□□□ 11.5
VIM-205ENST00000485947 HCN3Q9P1Z3 774 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 LEF1Q9UJU2 399 aaPredicted RBP15.92■□□□□ 0.14
VIM-205ENST00000485947 DOCK10Q96BY6 2186 aa15.92■□□□□ 0.14
VIM-205ENST00000485947 CNTRLQ7Z7A1 2325 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 TRAV17A0A0B4J275 112 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 B2RBV5 119 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 C4orf51C9J302 202 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 TBX19O60806 448 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 GNLYP22749 145 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 CPA2P48052 419 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 TAS2R50P59544 299 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 RAB8AP61006 207 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 ARG2P78540 354 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 MXRA7P84157 204 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 RHAGQ02094 409 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 HEPACAMQ14CZ8 416 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 NSDHLQ15738 373 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 DNAL1Q4LDG9 190 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 DEFB134Q4QY38 66 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 REP15Q6BDI9 236 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 FAAH2Q6GMR7 532 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 MRM1Q6IN84 353 aaKnown RBP15.91■□□□□ 0.14
VIM-205ENST00000485947 HACD2Q6Y1H2 254 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 ZNF793Q6ZN11 406 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 ANKRD37Q7Z713 158 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 ACOT4Q8N9L9 421 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 M1APQ8TC57 530 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 BRIX1Q8TDN6 353 aaKnown RBP15.91■□□□□ 0.14
VIM-205ENST00000485947 ROPN1LQ96C74 230 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 RCN3Q96D15 328 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 ZNF764Q96H86 408 aaPredicted RBP15.91■□□□□ 0.14
VIM-205ENST00000485947 SERINC2Q96SA4 455 aa15.91■□□□□ 0.14
VIM-205ENST00000485947 LPAR4Q99677 370 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms