RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 TAS2R9Q9NYW1 312 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 TAGLN3Q9UI15 199 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 ERVK-11Q9UQG0 969 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 MAN2B2Q9Y2E5 1009 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 A0A1W2PQ72 361 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 RFXANKO14593 260 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 KLK10O43240 276 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 SLITRK5O94991 958 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 ABCB1P08183 1280 aaPredicted RBP16.41■□□□□ 0.22
CHMP3-207ENST00000485465 CT62P0C5K7 136 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 SOX18P35713 384 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 TRPC1P48995 793 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 CDK9P50750 372 aaKnown RBP16.41■□□□□ 0.22
CHMP3-207ENST00000485465 EEF1A2Q05639 463 aaKnown RBP16.41■□□□□ 0.22
CHMP3-207ENST00000485465 SPRED3Q2MJR0 410 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 MMEL1Q495T6 779 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 COQ5Q5HYK3 327 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 REP15Q6BDI9 236 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 FAM111BQ6SJ93 734 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 KIRREL2Q6UWL6 708 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 C6orf89Q6UWU4 347 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 TMEM107Q6UX40 140 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 RAB43Q86YS6 212 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 GALNT12Q8IXK2 581 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 DPP10Q8N608 796 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 OR14A16Q8NHC5 309 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 GOT1L1Q8NHS2 421 aaPredicted RBP16.41■□□□□ 0.22
CHMP3-207ENST00000485465 PSMA8Q8TAA3 256 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 DOK4Q8TEW6 326 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 KAT2AQ92830 837 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 DAZLQ92904 295 aaKnown RBP16.41■□□□□ 0.22
CHMP3-207ENST00000485465 ELP4Q96EB1 424 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 PANX1Q96RD7 426 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 NPAS2Q99743 824 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 WDR77Q9BQA1 342 aaPredicted RBP16.41■□□□□ 0.22
CHMP3-207ENST00000485465 TRIM4Q9C037 500 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 ZNF700Q9H0M5 742 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 NEUROD4Q9HD90 331 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 SIRT3Q9NTG7 399 aaPredicted RBP16.41■□□□□ 0.22
CHMP3-207ENST00000485465 MAT2BQ9NZL9 334 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 MAP10Q9P2G4 905 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 CLCA3PQ9Y6N3 262 aa16.41■□□□□ 0.22
CHMP3-207ENST00000485465 CCDC88CQ9P219 2028 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 A0A096LPI6 279 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 IGHV1-45A0A0A0MS14 117 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 SAGE2PA6NJ88 616 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 PLOD2O00469 737 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 DYRK3O43781 588 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 CDKN2CP42773 168 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 PGDP52209 483 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 ZNF267Q14586 743 aaPredicted RBP16.4■□□□□ 0.22
CHMP3-207ENST00000485465 PCOLCEQ15113 449 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 C6orf10Q5SRN2 563 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 C6orf163Q5TEZ5 329 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 PAPD4Q6PIY7 484 aaKnown RBP16.4■□□□□ 0.22
CHMP3-207ENST00000485465 VWA5B2Q8N398 1253 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 OR7G2Q8NG99 324 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 OR11G2Q8NGC1 345 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 ADAMTS17Q8TE56 1095 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 CTHRC1Q96CG8 243 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 RCN3Q96D15 328 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 NSL1Q96IY1 281 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 LPAR4Q99677 370 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 PAIP1Q9H074 479 aaKnown RBP16.4■□□□□ 0.22
CHMP3-207ENST00000485465 CXorf36Q9H7Y0 433 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 ZNF639Q9UID6 485 aa16.4■□□□□ 0.22
CHMP3-207ENST00000485465 HRKO00198 91 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 MRASO14807 208 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 PLOD3O60568 738 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 ERN1O75460 977 aaKnown RBP16.39■□□□□ 0.21
CHMP3-207ENST00000485465 SEC24DO94855 1032 aaPredicted RBP16.39■□□□□ 0.21
CHMP3-207ENST00000485465 UBOX5O94941 541 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 KCNH1O95259 989 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 CBX6O95503 412 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 DDAH2O95865 285 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 GSNP06396 782 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 IFI6P09912 130 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 COX6A1P12074 109 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 WT1P19544 449 aaPredicted RBP16.39■□□□□ 0.21
CHMP3-207ENST00000485465 S1PR1P21453 382 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 MC3RP41968 323 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 MRPS35P82673 323 aaKnown RBP16.39■□□□□ 0.21
CHMP3-207ENST00000485465 TRMT12Q53H54 448 aaKnown RBP16.39■□□□□ 0.21
CHMP3-207ENST00000485465 FHL5Q5TD97 284 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 ZNF621Q6ZSS3 439 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 NDUFAF7Q7L592 441 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 MRGPREQ86SM8 312 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 PCYOX1LQ8NBM8 494 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 MORN4Q8NDC4 146 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 NFAM1Q8NET5 270 aaPredicted RBP16.39■□□□□ 0.21
CHMP3-207ENST00000485465 DNAJB8Q8NHS0 232 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 SLC2A12Q8TD20 617 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 SENP5Q96HI0 755 aaPredicted RBP16.39■□□□□ 0.21
CHMP3-207ENST00000485465 VPS50Q96JG6 964 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 MAGED4Q96JG8 741 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 IP6K3Q96PC2 410 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 CCNL2Q96S94 520 aaPredicted RBP16.39■□□□□ 0.21
CHMP3-207ENST00000485465 TUBB6Q9BUF5 446 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 CNPPD1Q9BV87 410 aa16.39■□□□□ 0.21
CHMP3-207ENST00000485465 EFCAB1Q9HAE3 211 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms