RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 OR4D1Q15615 310 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 ZKSCAN8Q15776 578 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-227ENST00000485102 DEFB113Q30KQ7 82 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 TEX35Q5T0J7 233 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 PRAMEF20Q5VT98 475 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 NSUN5P2Q63ZY6 315 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 TMEM198Q66K66 360 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 DGAT2L6Q6ZPD8 337 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 SLC29A4Q7RTT9 530 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 GPR180Q86V85 440 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 ANKMY2Q8IV38 441 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 OR4N5Q8IXE1 308 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 ZNF441Q8N8Z8 693 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 FBXO36Q8NEA4 188 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 IFT81Q8WYA0 676 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 RGMAQ96B86 450 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 HSPBAP1Q96EW2 488 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 GPR22Q99680 433 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 DOHHQ9BU89 302 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 WWTR1Q9GZV5 400 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 PLEKHF2Q9H8W4 249 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 PHF11Q9UIL8 331 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 MTO1Q9Y2Z2 717 aaKnown RBP11.94□□□□□ -0.5
HDAC6-227ENST00000485102 FN1P02751 2386 aaKnown RBP11.93□□□□□ -0.5
HDAC6-227ENST00000485102 MBD3L4A6NDZ8 208 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-227ENST00000485102 MBD3L3A6NE82 208 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-227ENST00000485102 TUBAL3A6NHL2 446 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 MBD3L5A6NJ08 208 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-227ENST00000485102 TP53I11O14683 189 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 DRD2P14416 443 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 STMN1P16949 149 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 STX2P32856 288 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 CDK9P50750 372 aaKnown RBP11.93□□□□□ -0.5
HDAC6-227ENST00000485102 SLC7A5Q01650 507 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 FASTKD3Q14CZ7 662 aaKnown RBP11.93□□□□□ -0.5
HDAC6-227ENST00000485102 FBXO48Q5FWF7 155 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 MRM1Q6IN84 353 aaKnown RBP11.93□□□□□ -0.5
HDAC6-227ENST00000485102 RNF111Q6ZNA4 994 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 ZBED8Q8IZ13 594 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 TAGAPQ8N103 731 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 SPATA6LQ8N4H0 392 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 FAM13CQ8NE31 585 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 MBD3L2Q8NHZ7 208 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-227ENST00000485102 STAG3L4Q8TBR4 150 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 FBXO25Q8TCJ0 367 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 UBTD2Q8WUN7 234 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 PPWD1Q96BP3 646 aaKnown RBP11.93□□□□□ -0.5
HDAC6-227ENST00000485102 ZNF597Q96LX8 424 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 CENPKQ9BS16 269 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 ANGPTL4Q9BY76 406 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 CALHM2Q9HA72 323 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 SMYD2Q9NRG4 433 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 PSD3Q9NYI0 1048 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 GRHL1Q9NZI5 618 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 CD274Q9NZQ7 290 aa11.93□□□□□ -0.5
HDAC6-227ENST00000485102 C15orf38-AP3S2A0A0A6YYH1 394 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 K7EPI3 171 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 PLPP1O14494 284 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 CCNT2O60583 730 aaKnown RBP11.92□□□□□ -0.5
HDAC6-227ENST00000485102 CDH16O75309 829 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 CLPSP04118 112 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 RHOXF2BP0C7M4 288 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 SLC35E2BP0CK96 405 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 SLC35E2P0CK97 266 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 TACR1P25103 407 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 CTSSP25774 331 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 GDF1P27539 372 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 OPRM1P35372 400 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 BUD31P41223 144 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-227ENST00000485102 TRPC1P48995 793 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 HERVK_113P63132 956 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 ERVK-8P63133 956 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 NAB1Q13506 487 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 RPS6KA2Q15349 733 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 FNDC7Q5VTL7 733 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 GRHL2Q6ISB3 625 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 WDR93Q6P2C0 686 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 ISCA2Q86U28 154 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 C17orf47Q8NEP4 570 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 HUS1BQ8NHY5 278 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 RIT1Q92963 219 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 C18orf12Q96KH6 178 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 PKNOX2Q96KN3 472 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 CPNE1Q99829 537 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 RHOXF2Q9BQY4 288 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 ERVK-6Q9BXR3 956 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 ZNF717Q9BY31 904 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-227ENST00000485102 OR51B5Q9H339 312 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 DDX31Q9H8H2 851 aaKnown RBP11.92□□□□□ -0.5
HDAC6-227ENST00000485102 CAB39LQ9H9S4 337 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 SNX15Q9NRS6 342 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 TXNDC16Q9P2K2 825 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 ERVK-19Q9WJR5 959 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 ASB4Q9Y574 426 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 KIAA1549Q9HCM3 1950 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 TLN2Q9Y4G6 2542 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 CSPG4Q6UVK1 2322 aa11.92□□□□□ -0.5
HDAC6-227ENST00000485102 KDM4EB2RXH2 506 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-227ENST00000485102 PHGDHO43175 533 aaKnown RBP11.91□□□□□ -0.5
HDAC6-227ENST00000485102 PTX3P26022 381 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms