RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 WDR74Q6RFH5 385 aaPredicted RBP13.19□□□□□ -0.3
CLK3-204ENST00000483723 UGT2A3Q6UWM9 527 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 TMEM179BQ7Z7N9 219 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 ZDHHC13Q8IUH4 622 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 ARMC8Q8IUR7 673 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 LGI4Q8N135 537 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 FAM181AQ8N9Y4 354 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 NUP43Q8NFH3 380 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 OR6C4Q8NGE1 309 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 OR4C6Q8NH72 309 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 LZICQ8WZA0 190 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 ANKRD9Q96BM1 317 aaPredicted RBP13.19□□□□□ -0.3
CLK3-204ENST00000483723 NRBF2Q96F24 287 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 TPD52L3Q96J77 140 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 VNN3Q9NY84 501 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 UBAP1Q9NZ09 502 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 PRAMEF25A6NGN4 478 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 FAM227AF5H4B4 570 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 GNGT2O14610 69 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 ASNA1O43681 348 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 FGF17O60258 216 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 RDH16O75452 317 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 PDE9AO76083 593 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 SLITRK5O94991 958 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 MFN2O95140 757 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 ATP1B1P05026 303 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 ALPLP05186 524 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 BCHEP06276 602 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 LYNP07948 512 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 MSL3P1P0C860 447 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 PTGER1P34995 402 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 MC3RP41968 323 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 IST1P53990 364 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 ITGA1P56199 1179 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 SHC2P98077 582 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 PPP2R2BQ00005 443 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 LTB4RQ15722 352 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 IFI44LQ53G44 452 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 ZNF628Q5EBL2 1059 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 EXOSC6Q5RKV6 272 aaKnown RBP13.19□□□□□ -0.3
CLK3-204ENST00000483723 FHL5Q5TD97 284 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 PRAMEF8Q5VWM4 474 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 PRAMEF7Q5VXH5 474 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 SHQ1Q6PI26 577 aaKnown RBP13.19□□□□□ -0.3
CLK3-204ENST00000483723 PRSS42Q7Z5A4 293 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 CARM1Q86X55 608 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 HIPK1Q86Z02 1210 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 OR4N5Q8IXE1 308 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 OR2L13Q8N349 312 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 D2HGDHQ8N465 521 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 OR7G2Q8NG99 324 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 MAGEE2Q8TD90 523 aaPredicted RBP13.19□□□□□ -0.3
CLK3-204ENST00000483723 SLC41A2Q96JW4 573 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 RSPO3Q9BXY4 272 aaPredicted RBP13.19□□□□□ -0.3
CLK3-204ENST00000483723 CAPN10Q9HC96 672 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 THSD1Q9NS62 852 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 SMPD3Q9NY59 655 aaPredicted RBP13.19□□□□□ -0.3
CLK3-204ENST00000483723 PTGFRNQ9P2B2 879 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 P2RX2Q9UBL9 471 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 RAB23Q9ULC3 237 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 MAGED1Q9Y5V3 778 aaPredicted RBP13.19□□□□□ -0.3
CLK3-204ENST00000483723 A0A087WV62 115 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 A0A0A6YYC8 382 aaPredicted RBP13.18□□□□□ -0.3
CLK3-204ENST00000483723 LY6G6EA0A0G2JKS1 128 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 BLACEA4D250 179 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 C5orf58C9J3I9 102 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 I3L1I5 382 aaPredicted RBP13.18□□□□□ -0.3
CLK3-204ENST00000483723 OPN1SWP03999 348 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 MYF5P13349 255 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 CD247P20963 164 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 CSF2RBP32927 897 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 GCGRP47871 477 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 PRKAG1P54619 331 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 HSD11B2P80365 405 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 MGAT2Q10469 447 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 MERTKQ12866 999 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 LASP1Q14847 261 aaKnown RBP13.18□□□□□ -0.3
CLK3-204ENST00000483723 SYPL1Q16563 259 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 SLC36A3Q495N2 470 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 STK32CQ86UX6 486 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 KMT5CQ86Y97 462 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 GATAD2AQ86YP4 633 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 TTC29Q8NA56 475 aaPredicted RBP13.18□□□□□ -0.3
CLK3-204ENST00000483723 OR5D16Q8NGK9 328 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 CEP76Q8TAP6 659 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 ZNF675Q8TD23 568 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 ADAMTS18Q8TE60 1221 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 APOBEC4Q8WW27 367 aaKnown RBP13.18□□□□□ -0.3
CLK3-204ENST00000483723 XAGE5Q8WWM1 108 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 KAT2AQ92830 837 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 C16orf58Q96GQ5 468 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 MAGED4Q96JG8 741 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 RDH12Q96NR8 316 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 ACTRT3Q9BYD9 372 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 ANKRD60Q9BZ19 345 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 SPRTNQ9H040 489 aaPredicted RBP13.18□□□□□ -0.3
CLK3-204ENST00000483723 GABARAPL1Q9H0R8 117 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 SOHLH2Q9NX45 425 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 NDUFAF4Q9P032 175 aa13.18□□□□□ -0.3
CLK3-204ENST00000483723 IFT80Q9P2H3 777 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms