RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 NCLNQ969V3 563 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 MTERF3Q96E29 417 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 ZNF681Q96N22 645 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 BBC3Q96PG8 261 aaPredicted RBP12.35□□□□□ -0.43
HDAC1-208ENST00000482310 NMUR2Q9GZQ4 415 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 SDR39U1Q9NRG7 319 aaPredicted RBP12.35□□□□□ -0.43
HDAC1-208ENST00000482310 ZIM2Q9NZV7 527 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 SNX8Q9Y5X2 465 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 SMG1Q96Q15 3661 aaKnown RBP12.35□□□□□ -0.43
HDAC1-208ENST00000482310 IGSF10Q6WRI0 2623 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 LOC102723996A0A087X1L8 192 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 TRBV11-1A0A0K0K1C0 115 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 A0A1W2PRB8 838 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 MYO1GB0I1T2 1018 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 K7ENP7 123 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 FCHO1O14526 889 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 DYRK3O43781 588 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 FAM107AO95990 144 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 HPP00738 406 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 CYC1P08574 325 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 PCSK2P16519 638 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 ITGA3P26006 1051 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 SSTR4P31391 388 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 MPIP34949 423 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 MC3RP41968 323 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 CDK9P50750 372 aaKnown RBP12.34□□□□□ -0.43
HDAC1-208ENST00000482310 UCNP55089 124 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 KCNK10P57789 538 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 SLC26A5P58743 744 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 DCAF10Q5QP82 559 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 FCRLBQ6BAA4 426 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 INO80CQ6PI98 192 aaPredicted RBP12.34□□□□□ -0.43
HDAC1-208ENST00000482310 MTDHQ86UE4 582 aaKnown RBP12.34□□□□□ -0.43
HDAC1-208ENST00000482310 SIMC1Q8NDZ2 872 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 OR4A15Q8NGL6 344 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 OR14A16Q8NHC5 309 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 ZFP28Q8NHY6 868 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 SLC2A12Q8TD20 617 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 THAP3Q8WTV1 239 aaPredicted RBP12.34□□□□□ -0.43
HDAC1-208ENST00000482310 STON2Q8WXE9 905 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 DAZLQ92904 295 aaKnown RBP12.34□□□□□ -0.43
HDAC1-208ENST00000482310 VPS33AQ96AX1 596 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 VPS50Q96JG6 964 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 AMDHD1Q96NU7 426 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 OR52E6Q96RD3 313 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 PELOQ9BRX2 385 aaKnown RBP12.34□□□□□ -0.43
HDAC1-208ENST00000482310 FAM117AQ9C073 453 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 BHLHE41Q9C0J9 482 aaPredicted RBP12.34□□□□□ -0.43
HDAC1-208ENST00000482310 ZNF385DQ9H6B1 395 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 BCAP29Q9UHQ4 241 aa12.34□□□□□ -0.43
HDAC1-208ENST00000482310 FAM234BA2RU67 622 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 NDUFAB1O14561 156 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 PRKNO60260 465 aaPredicted RBP12.33□□□□□ -0.44
HDAC1-208ENST00000482310 TBX19O60806 448 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 DDAH2O95865 285 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 ATP1B1P05026 303 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 PGRP06401 933 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 ITGAMP11215 1152 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 DDX5P17844 614 aaKnown RBP12.33□□□□□ -0.44
HDAC1-208ENST00000482310 ZFP36L2P47974 494 aaKnown RBP12.33□□□□□ -0.44
HDAC1-208ENST00000482310 ATP4BP51164 291 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 CCL11P51671 97 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 WNT3P56703 355 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 C21orf58P58505 322 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 PHC1P78364 1004 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 CBX1P83916 185 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 SRSF11Q05519 484 aaKnown RBP12.33□□□□□ -0.44
HDAC1-208ENST00000482310 Q0VFX4 171 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 PRICKLE4Q2TBC4 344 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 COL28A1Q2UY09 1125 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 TRMT12Q53H54 448 aaKnown RBP12.33□□□□□ -0.44
HDAC1-208ENST00000482310 GKAP1Q5VSY0 366 aaPredicted RBP12.33□□□□□ -0.44
HDAC1-208ENST00000482310 MTERF4Q7Z6M4 381 aaKnown RBP12.33□□□□□ -0.44
HDAC1-208ENST00000482310 SAMD14Q8IZD0 417 aaPredicted RBP12.33□□□□□ -0.44
HDAC1-208ENST00000482310 CLEC4FQ8N1N0 589 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 VWA5B2Q8N398 1253 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 SIRT6Q8N6T7 355 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 CLEC1AQ8NC01 280 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 B3GNT7Q8NFL0 401 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 OR5AK3PQ8NH89 298 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 BCAS4Q8TDM0 211 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 THAP4Q8WY91 577 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 TESCQ96BS2 214 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 COQ8BQ96D53 544 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 ZBED6CLQ96FA7 236 aaPredicted RBP12.33□□□□□ -0.44
HDAC1-208ENST00000482310 THOC3Q96J01 351 aaKnown RBP12.33□□□□□ -0.44
HDAC1-208ENST00000482310 FER1L6-AS2Q96M78 137 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 IP6K3Q96PC2 410 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 GAL3ST4Q96RP7 486 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 TUBB6Q9BUF5 446 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 NUDT9Q9BW91 350 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 ING2Q9H160 280 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 LIN28AQ9H9Z2 209 aaKnown RBP12.33□□□□□ -0.44
HDAC1-208ENST00000482310 CXorf21Q9HAI6 301 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 SAR1AQ9NR31 198 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 MAT2BQ9NZL9 334 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 COPS7AQ9UBW8 275 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 MAPRE3Q9UPY8 281 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 SSUH2Q9Y2M2 353 aa12.33□□□□□ -0.44
HDAC1-208ENST00000482310 ARL2BPQ9Y2Y0 163 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms