RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ASB4Q9Y574 426 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 LIPGQ9Y5X9 500 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 OTOGQ6ZRI0 2925 aa13.31□□□□□ -0.28
SMARCE1-209ENST00000478349 A0A1W2PR48 441 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 ESYT3A0FGR9 886 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 GLOD5A6NK44 160 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 HSPB2A8KAH6 182 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 TMPRSS11DO60235 418 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 ZWINTO95229 277 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 NADKO95544 446 aaPredicted RBP13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 OTCP00480 354 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 ALDOAP04075 364 aaKnown RBP13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 GDF1P27539 372 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 GMPRP36959 345 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 MASP1P48740 699 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 HSPB2Q16082 182 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 NTRK2Q16620 822 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 WHAMMP3Q1A5X7 153 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 GGTA1PQ4G0N0 100 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 PACS2Q86VP3 889 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 PM20D2Q8IYS1 436 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 MNS1Q8NEH6 495 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 C17orf47Q8NEP4 570 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 OR7G1Q8NGA0 311 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 OR10G3Q8NGC4 313 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 OR4K14Q8NGD5 310 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 NEIL3Q8TAT5 605 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 NTMT1Q9BV86 223 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 ZNF717Q9BY31 904 aaPredicted RBP13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 ALKBH4Q9NXW9 302 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 PSME2Q9UL46 239 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 SNX6Q9UNH7 406 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 RNF11Q9Y3C5 154 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 HRH3Q9Y5N1 445 aa13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 CHCHD2Q9Y6H1 151 aaPredicted RBP13.3□□□□□ -0.28
SMARCE1-209ENST00000478349 ZNF354AO60765 605 aaPredicted RBP13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 SIX3O95343 332 aaPredicted RBP13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 GLI4P10075 376 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 CD1EP15812 388 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 DEKP35659 375 aaKnown RBP13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 MAPK12P53778 367 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 SLC7A5Q01650 507 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 TFF3Q07654 80 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 CCNYL2Q5T2Q4 361 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 LGSNQ5TDP6 509 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 RNF175Q8N4F7 328 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 RPRMLQ8N4K4 120 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 SLC44A1Q8WWI5 657 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 PHF21BQ96EK2 531 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 HSPBAP1Q96EW2 488 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 FMO2Q99518 471 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 MRPL57Q9BQC6 102 aaKnown RBP13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 FAIM2Q9BWQ8 316 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 UCK2Q9BZX2 261 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 MRPL46Q9H2W6 279 aaKnown RBP13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 CXorf21Q9HAI6 301 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 NPDC1Q9NQX5 325 aaPredicted RBP13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 ZDHHC18Q9NUE0 388 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 NINJ2Q9NZG7 142 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 XPR1Q9UBH6 696 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 PCTPQ9UKL6 214 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 FAM215AQ9Y5M1 114 aa13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMARCE1-209ENST00000478349 FBN2P35556 2912 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 C15orf38-AP3S2A0A0A6YYH1 394 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 C1orf226A1L170 272 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 HMX2A2RU54 273 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 AHRRA9YTQ3 701 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 HRKO00198 91 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 DVL2O14641 736 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 PRKRAO75569 313 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 ACSL3O95573 720 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 CELA3AP09093 270 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 NT5EP21589 574 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 NR0B1P51843 470 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 NEK2P51955 445 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 FUT7Q11130 342 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 TRADDQ15628 312 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 LYPD8Q6UX82 237 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 SPNS3Q6ZMD2 512 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 DGAT2L6Q6ZPD8 337 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 WDR53Q7Z5U6 358 aaPredicted RBP13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 MILR1Q7Z6M3 343 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 VWA5B2Q8N398 1253 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 TRPC4APQ8TEL6 797 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 ISL2Q96A47 359 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 GPR78Q96P69 363 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 PAFAH2Q99487 392 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 LRRC1Q9BTT6 524 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 FUT8Q9BYC5 575 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 OR10A5Q9H207 317 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 ZNF180Q9UJW8 692 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 CNOT11Q9UKZ1 510 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 NFU1Q9UMS0 254 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 NPFFR2Q9Y5X5 522 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 PCNX1Q96RV3 2341 aa13.28□□□□□ -0.28
SMARCE1-209ENST00000478349 CCDC168Q8NDH2 2452 aa13.27□□□□□ -0.29
SMARCE1-209ENST00000478349 A0A0G2JNJ9 132 aa13.27□□□□□ -0.29
SMARCE1-209ENST00000478349 LRRC14BA6NHZ5 514 aa13.27□□□□□ -0.29
SMARCE1-209ENST00000478349 LRRC3CA6NJW4 275 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms