RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 DEPPQ9NTK1 212 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 CCM2LQ9NUG4 571 aaPredicted RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 SPATA7Q9P0W8 599 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 KCNE5Q9UJ90 142 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 ZNF180Q9UJW8 692 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 ZNF223Q9UK11 482 aaPredicted RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 CDC14AQ9UNH5 594 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 MRFAP1Q9Y605 127 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 RAI1Q7Z5J4 1906 aaPredicted RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 CR1P17927 2039 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 CHD3Q12873 2000 aaKnown RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 ALPK2Q86TB3 2170 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 KCNE1BA0A087WTH5 132 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 TCRBV7S3A2A0A539 114 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 DNAJC9-AS1A6NH13 148 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 KDM4EB2RXH2 506 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 C4orf51C9J302 202 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 H0YIG0 161 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 GFYI3L273 518 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 HS6ST1O60243 411 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 PRKNO60260 465 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 CTAG2O75638 210 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 SLC25A12O75746 678 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 CDC123O75794 336 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 TJP3O95049 919 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 NSA2O95478 260 aaKnown RBP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 UQCRHP07919 91 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 ANXA5P08758 320 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 HOXD4P09016 255 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 RAP2AP10114 183 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 ICAM2P13598 275 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 EZRP15311 586 aaKnown RBP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 ZNF24P17028 368 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 TFEBP19484 476 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 IMPA1P29218 277 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 EEF1DP29692 281 aaKnown RBP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 FMO4P31512 558 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 RPA3P35244 121 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 ITGA8P53708 1063 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 PNLIPRP1P54315 467 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 CASP6P55212 293 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 RWDD2BP57060 319 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 NUP107P57740 925 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 MLF1P58340 268 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 OLR1P78380 273 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 PRAMEP78395 509 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 BTG2P78543 158 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 CUL1Q13616 776 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 TSTA3Q13630 321 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 TRIM14Q14142 442 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 ABRAXAS2Q15018 415 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 SIX1Q15475 284 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 MAPKAPK3Q16644 382 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 TYSND1Q2T9J0 566 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 MINDY4Q4G0A6 757 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 ANKRD20A4Q4UJ75 823 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 PTRHD1Q6GMV3 140 aaKnown RBP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 RTL6Q6ICC9 239 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 ZNF549Q6P9A3 640 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 MBOAT1Q6ZNC8 495 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 C16orf47Q6ZP98 133 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 CENPUQ71F23 418 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 Q71RC1 249 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 OTOAQ7RTW8 1153 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 ZNF572Q7Z3I7 529 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 MDGA2Q7Z553 956 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 PCGF5Q86SE9 256 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 SLC26A11Q86WA9 606 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 RPS19BP1Q86WX3 136 aaKnown RBP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 C16orf52Q8NHV5 167 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 SUN3Q8TAQ9 357 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 ZCCHC10Q8TBK6 192 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 CA5BP1Q8WTZ4 195 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 SKA2Q8WVK7 121 aaPredicted RBP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 PPP1R2P1Q96PQ5 205 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 ALS2CR12Q96Q35 445 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 OLFM1Q99784 485 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 FOXC2Q99958 501 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 AIFM2Q9BRQ8 373 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 SPNS1Q9H2V7 528 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 EMC7Q9NPA0 242 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 ABCF3Q9NUQ8 709 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 TMEM140Q9NV12 185 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 ZNHIT6Q9NWK9 470 aaKnown RBP4.25□□□□□ -1.73
CKS1B-207ENST00000477676 LRFN1Q9P244 771 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 TEKT2Q9UIF3 430 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 GNPTGQ9UJJ9 305 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 CRYL1Q9Y2S2 319 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 L3MBTL1Q9Y468 752 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 CLDN16Q9Y5I7 305 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 LIPGQ9Y5X9 500 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 CADP27708 2225 aa4.25□□□□□ -1.73
CKS1B-207ENST00000477676 FREM1Q5H8C1 2179 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 ERI2A8K979 691 aaKnown RBP4.24□□□□□ -1.73
CKS1B-207ENST00000477676 MAGEB17A8MXT2 336 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 CXorf49A8MYA2 514 aaPredicted RBP4.24□□□□□ -1.73
CKS1B-207ENST00000477676 AKR1B15C9JRZ8 316 aaPredicted RBP4.24□□□□□ -1.73
CKS1B-207ENST00000477676 GOLGA6L19H0YKK7 550 aa4.24□□□□□ -1.73
CKS1B-207ENST00000477676 NDC80O14777 642 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms