RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 DHRS1Q96LJ7 313 aa20.52■□□□□ 0.87
CCM2-206ENST00000474617 KCMF1Q9P0J7 381 aa20.52■□□□□ 0.87
CCM2-206ENST00000474617 TRPC4Q9UBN4 977 aa20.52■□□□□ 0.87
CCM2-206ENST00000474617 POMT2Q9UKY4 750 aa20.52■□□□□ 0.87
CCM2-206ENST00000474617 DAPP1Q9UN19 280 aa20.52■□□□□ 0.87
CCM2-206ENST00000474617 KLHL20Q9Y2M5 609 aa20.52■□□□□ 0.87
CCM2-206ENST00000474617 PCDHGB1Q9Y5G3 927 aa20.52■□□□□ 0.87
CCM2-206ENST00000474617 BLACEA4D250 179 aa20.51■□□□□ 0.87
CCM2-206ENST00000474617 SLC1A7O00341 560 aa20.51■□□□□ 0.87
CCM2-206ENST00000474617 SYT5O00445 386 aa20.51■□□□□ 0.87
CCM2-206ENST00000474617 CCNB2O95067 398 aa20.51■□□□□ 0.87
CCM2-206ENST00000474617 OR12D1P0DN82 309 aa20.51■□□□□ 0.87
CCM2-206ENST00000474617 CDH12P55289 794 aa20.51■□□□□ 0.87
CCM2-206ENST00000474617 RPS26P62854 115 aaKnown RBP20.51■□□□□ 0.87
CCM2-206ENST00000474617 RACK1P63244 317 aaKnown RBP20.51■□□□□ 0.87
CCM2-206ENST00000474617 C18orf63Q68DL7 685 aa20.51■□□□□ 0.87
CCM2-206ENST00000474617 USP53Q70EK8 1073 aa20.51■□□□□ 0.87
CCM2-206ENST00000474617 CCDC116Q8IYX3 515 aa20.51■□□□□ 0.87
CCM2-206ENST00000474617 IPCEF1Q8WWN9 437 aaPredicted RBP20.51■□□□□ 0.87
CCM2-206ENST00000474617 C10orf90Q96M02 699 aa20.51■□□□□ 0.87
CCM2-206ENST00000474617 TRNT1Q96Q11 434 aaKnown RBP20.51■□□□□ 0.87
CCM2-206ENST00000474617 TMEM121BQ9BXQ6 578 aaPredicted RBP20.51■□□□□ 0.87
CCM2-206ENST00000474617 POLR1BQ9H9Y6 1135 aa20.51■□□□□ 0.87
CCM2-206ENST00000474617 ACER3Q9NUN7 267 aa20.51■□□□□ 0.87
CCM2-206ENST00000474617 TMCC3Q9ULS5 477 aa20.51■□□□□ 0.87
CCM2-206ENST00000474617 SNRNP200O75643 2136 aaKnown RBP20.5■□□□□ 0.87
CCM2-206ENST00000474617 A0A0J9YVX5 310 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 LILRA5A6NI73 299 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 H0YGG7 62 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 ANGPTL1O95841 491 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 CD38P28907 300 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 CLK3P49761 638 aaKnown RBP20.5■□□□□ 0.87
CCM2-206ENST00000474617 LIM2P55344 173 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 ARF3P61204 181 aaPredicted RBP20.5■□□□□ 0.87
CCM2-206ENST00000474617 ROR2Q01974 943 aaKnown RBP20.5■□□□□ 0.87
CCM2-206ENST00000474617 DYNC1I2Q13409 638 aaKnown RBP20.5■□□□□ 0.87
CCM2-206ENST00000474617 LSAMPQ13449 338 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 RAPSNQ13702 412 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 GALNT5Q7Z7M9 940 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 TRIM73Q86UV7 250 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 TAGAPQ8N103 731 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 FAM46DQ8NEK8 389 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 XAGE5Q8WWM1 108 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 TANKQ92844 425 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 MS4A4EQ96PG1 132 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 FEVQ99581 238 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 BARD1Q99728 777 aaKnown RBP20.5■□□□□ 0.87
CCM2-206ENST00000474617 MACROD1Q9BQ69 325 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 ACTRT3Q9BYD9 372 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 SERHL2Q9H4I8 314 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 ACAD8Q9UKU7 415 aa20.5■□□□□ 0.87
CCM2-206ENST00000474617 EME2A4GXA9 379 aaPredicted RBP20.49■□□□□ 0.87
CCM2-206ENST00000474617 NOL3O60936 208 aaKnown RBP20.49■□□□□ 0.87
CCM2-206ENST00000474617 MITFO75030 526 aaPredicted RBP20.49■□□□□ 0.87
CCM2-206ENST00000474617 HMGN2P05204 90 aaKnown RBP20.49■□□□□ 0.87
CCM2-206ENST00000474617 OR1E2P47887 323 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 MAPK11Q15759 364 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 MEP1AQ16819 746 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 DUSP7Q16829 419 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 FAM180BQ6P0A1 224 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 SLC36A4Q6YBV0 504 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 SZRD1Q7Z422 152 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 ERI1Q8IV48 349 aaKnown RBP20.49■□□□□ 0.87
CCM2-206ENST00000474617 SMYD1Q8NB12 490 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 NUP43Q8NFH3 380 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 PMM1Q92871 262 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 RAB8BQ92930 207 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 SLC6A18Q96N87 628 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 COL21A1Q96P44 957 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 LRRC61Q9BV99 259 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 PINK1Q9BXM7 581 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 CXorf21Q9HAI6 301 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 CA14Q9ULX7 337 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 SNX11Q9Y5W9 270 aa20.49■□□□□ 0.87
CCM2-206ENST00000474617 GLOD5A6NK44 160 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 H3BSA7 217 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 FAAHO00519 579 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 MPZL2O60487 215 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 SRPX2O60687 465 aaPredicted RBP20.48■□□□□ 0.87
CCM2-206ENST00000474617 ADAP00813 363 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 DCKP27707 260 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 RPP38P78345 283 aaKnown RBP20.48■□□□□ 0.87
CCM2-206ENST00000474617 IL1RL1Q01638 556 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 MVKQ03426 396 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 EXOC3L2Q2M3D2 409 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 CTU2Q2VPK5 515 aaKnown RBP20.48■□□□□ 0.87
CCM2-206ENST00000474617 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.48■□□□□ 0.87
CCM2-206ENST00000474617 MLIPQ5VWP3 458 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 PTCRAQ6ISU1 281 aaPredicted RBP20.48■□□□□ 0.87
CCM2-206ENST00000474617 ZCCHC12Q6PEW1 402 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 SPEM1Q8N4L4 309 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 CSNK1A1LQ8N752 337 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 ADAMTS18Q8TE60 1221 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 NODALQ96S42 347 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 DOK1Q99704 481 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 CCDC3Q9BQI4 270 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 IER2Q9BTL4 223 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 TCEAL2Q9H3H9 227 aaPredicted RBP20.48■□□□□ 0.87
CCM2-206ENST00000474617 CACYBPQ9HB71 228 aaKnown RBP20.48■□□□□ 0.87
CCM2-206ENST00000474617 MGAT4BQ9UQ53 548 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms