RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 TICAM1Q8IUC6 712 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 CCDC116Q8IYX3 515 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 CISD2Q8N5K1 135 aaKnown RBP12.78□□□□□ -0.36
USF1-205ENST00000473969 ZNF321PQ8N8H1 164 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 FNDC5Q8NAU1 212 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 TMEM178AQ8NBL3 297 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 OR7G1Q8NGA0 311 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 ASB15Q8WXK1 588 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 NPAS2Q99743 824 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 SH3GL2Q99962 352 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 TRIM4Q9C037 500 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 ZNF395Q9H8N7 513 aaPredicted RBP12.78□□□□□ -0.36
USF1-205ENST00000473969 AGPAT4Q9NRZ5 378 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 HPF1Q9NWY4 346 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 MYOTQ9UBF9 498 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 BCAP29Q9UHQ4 241 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 ZNF223Q9UK11 482 aaPredicted RBP12.78□□□□□ -0.36
USF1-205ENST00000473969 EIF3LQ9Y262 564 aaKnown RBP12.78□□□□□ -0.36
USF1-205ENST00000473969 CFL2Q9Y281 166 aa12.78□□□□□ -0.36
USF1-205ENST00000473969 SETXQ7Z333 2677 aaKnown RBP12.78□□□□□ -0.36
USF1-205ENST00000473969 WWP2O00308 870 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 MAN1A2O60476 641 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 VPS4BO75351 444 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 BCAS2O75934 225 aaPredicted RBP12.77□□□□□ -0.37
USF1-205ENST00000473969 OR2J2O76002 312 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 RASAL1O95294 804 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 ATP1B1P05026 303 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 PLA2G2AP14555 144 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 RPL3P39023 403 aaKnown RBP12.77□□□□□ -0.37
USF1-205ENST00000473969 ST13P50502 369 aaKnown RBP12.77□□□□□ -0.37
USF1-205ENST00000473969 HK2P52789 917 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 TTMPQ5BVD1 217 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 RPUSD3Q6P087 351 aaKnown RBP12.77□□□□□ -0.37
USF1-205ENST00000473969 FAM180BQ6P0A1 224 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 OPN5Q6U736 354 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 FAM180AQ6UWF9 173 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 R3HCC1LQ7Z5L2 792 aaKnown RBP12.77□□□□□ -0.37
USF1-205ENST00000473969 GPALPP1Q8IXQ4 340 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 FAM9CQ8IZT9 166 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 ARMC10Q8N2F6 343 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 VWA5B2Q8N398 1253 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 Q8NA96 180 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 FAM98AQ8NCA5 519 aaKnown RBP12.77□□□□□ -0.37
USF1-205ENST00000473969 NUBPLQ8TB37 319 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 SLC22A8Q8TCC7 542 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 GFM2Q969S9 779 aaKnown RBP12.77□□□□□ -0.37
USF1-205ENST00000473969 CNRIP1Q96F85 164 aaPredicted RBP12.77□□□□□ -0.37
USF1-205ENST00000473969 PPP1R36Q96LQ0 422 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 TSSK3Q96PN8 268 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 GAL3ST4Q96RP7 486 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 OR10A5Q9H207 317 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 LIN28AQ9H9Z2 209 aaKnown RBP12.77□□□□□ -0.37
USF1-205ENST00000473969 RYDENQ9NUL5 291 aaKnown RBP12.77□□□□□ -0.37
USF1-205ENST00000473969 VPS4AQ9UN37 437 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 PCDHGA10Q9Y5H3 936 aa12.77□□□□□ -0.37
USF1-205ENST00000473969 DOCK10Q96BY6 2186 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 C2orf92A0A1B0GVN3 265 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 A0A1W2PS29 197 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 SLCO1B7G3V0H7 640 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 AKAP10O43572 662 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 PRKNO60260 465 aaPredicted RBP12.76□□□□□ -0.37
USF1-205ENST00000473969 IGKV3-11P04433 115 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 PRPS2P11908 318 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 BCKDHAP12694 445 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 SDC1P18827 310 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 SSTR4P31391 388 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 TRHRP34981 398 aaPredicted RBP12.76□□□□□ -0.37
USF1-205ENST00000473969 HPCAL1P37235 193 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 NCBP2P52298 156 aaKnown RBP eCLIP12.76□□□□□ -0.371e-7■■■■□ 26
USF1-205ENST00000473969 SLC37A1P57057 533 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 PPP2R2AP63151 447 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 MAP4K2Q12851 820 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 INAQ16352 499 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 MAPKAPK3Q16644 382 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 MPEG1Q2M385 716 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 XKR7Q5GH72 579 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 C6orf136Q5SQH8 315 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 CES4AQ5XG92 561 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 SPINK14Q6IE38 97 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 SLC25A25Q6KCM7 469 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 TAGAPQ8N103 731 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 CYP4Z2PQ8N1L4 340 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 ADCY4Q8NFM4 1077 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 LRRC8CQ8TDW0 803 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 PPCDCQ96CD2 204 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 SNRNP40Q96DI7 357 aaKnown RBP12.76□□□□□ -0.37
USF1-205ENST00000473969 FCRL1Q96LA6 429 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 SORT1Q99523 831 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 PRPF18Q99633 342 aaKnown RBP12.76□□□□□ -0.37
USF1-205ENST00000473969 C20orf27Q9GZN8 174 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 REEP4Q9H6H4 257 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 TIMMDC1Q9NPL8 285 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 KLHL1Q9NR64 748 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 SH3BP4Q9P0V3 963 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 PRODH2Q9UF12 536 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 BAIAP2L1Q9UHR4 511 aa12.76□□□□□ -0.37
USF1-205ENST00000473969 UQCRHLA0A096LP55 91 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 TRPC5OSA6NMA1 111 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 HRKO00198 91 aa12.75□□□□□ -0.37
USF1-205ENST00000473969 FLNBO75369 2602 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms