RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 ACTL7BQ9Y614 415 aa17.54■□□□□ 0.4
PTCD3-210ENST00000473829 ASPDHA6ND91 283 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 ANKUB1A6NFN9 424 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 GOLGA6L10A6NI86 522 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 NPIPB8E9PQR5 432 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 TM9SF1O15321 606 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 LYPLA1O75608 230 aaPredicted RBP17.53■□□□□ 0.4
PTCD3-210ENST00000473829 NADKO95544 446 aaPredicted RBP17.53■□□□□ 0.4
PTCD3-210ENST00000473829 ATP1B1P05026 303 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 LINC00032P0C843 101 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 DRD2P14416 443 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 MGAT2Q10469 447 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 FUT7Q11130 342 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 EBPQ15125 230 aaKnown RBP17.53■□□□□ 0.4
PTCD3-210ENST00000473829 MAPKAPK3Q16644 382 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 PRICKLE4Q2TBC4 344 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 EIF2S3LQ2VIR3 472 aaKnown RBP17.53■□□□□ 0.4
PTCD3-210ENST00000473829 FAM111BQ6SJ93 734 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 IL20RBQ6UXL0 311 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 CROCCP2Q86T23 111 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 NUDCD3Q8IVD9 361 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 ZNF615Q8N8J6 731 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 TMEM178AQ8NBL3 297 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 ST6GALNAC3Q8NDV1 305 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 SIMC1Q8NDZ2 872 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 OR5L2Q8NGL0 311 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 CDC26Q8NHZ8 85 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.53■□□□□ 0.4
PTCD3-210ENST00000473829 TWIST2Q8WVJ9 160 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 ASB15Q8WXK1 588 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 FRMD6Q96NE9 622 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 GAL3ST4Q96RP7 486 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 WWTR1Q9GZV5 400 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 ZNF395Q9H8N7 513 aaPredicted RBP17.53■□□□□ 0.4
PTCD3-210ENST00000473829 EML4Q9HC35 981 aaKnown RBP17.53■□□□□ 0.4
PTCD3-210ENST00000473829 MAT2BQ9NZL9 334 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 ZDHHC2Q9UIJ5 367 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 EXO1Q9UQ84 846 aaKnown RBP17.53■□□□□ 0.4
PTCD3-210ENST00000473829 EML6Q6ZMW3 1958 aa17.53■□□□□ 0.4
PTCD3-210ENST00000473829 A8MVJ9 347 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 SLC28A1O00337 649 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 PIP5K1BO14986 540 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 RGS14O43566 566 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 ITM2AO43736 263 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 EDN3P14138 238 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 CSNK2A2P19784 350 aaPredicted RBP17.52■□□□□ 0.4
PTCD3-210ENST00000473829 S1PR1P21453 382 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 TACR1P25103 407 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 SERPINB5P36952 375 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 DUSP8Q13202 625 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 FAM71E1Q6IPT2 247 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 NOXRED1Q6NXP6 359 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 LYPD8Q6UX82 237 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.52■□□□□ 0.4
PTCD3-210ENST00000473829 CLYBLQ8N0X4 340 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 ADCY4Q8NFM4 1077 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 EXOSC8Q96B26 276 aaKnown RBP17.52■□□□□ 0.4
PTCD3-210ENST00000473829 FCRL1Q96LA6 429 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 LRTM1Q9HBL6 345 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 KCNK9Q9NPC2 374 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 MYNNQ9NPC7 610 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 HPF1Q9NWY4 346 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 C1orf109Q9NX04 203 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 GIMAP2Q9UG22 337 aa17.52■□□□□ 0.4
PTCD3-210ENST00000473829 ZGRF1Q86YA3 2104 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 HIVEP3Q5T1R4 2406 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 USP9XQ93008 2570 aaPredicted RBP17.51■□□□□ 0.39
PTCD3-210ENST00000473829 OR6C76A6NM76 312 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 LSM1O15116 133 aaKnown RBP17.51■□□□□ 0.39
PTCD3-210ENST00000473829 SEC22BO75396 215 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 CHEK2O96017 543 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 MYZAPP0CAP1 466 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 NEFHP12036 1026 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 CASP8Q14790 479 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 HEPACAMQ14CZ8 416 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 CHI3L2Q15782 390 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 MPEG1Q2M385 716 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 PIGGQ5H8A4 983 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 SLC29A4Q7RTT9 530 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 DDIASQ8IXT1 998 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 LRRC25Q8N386 305 aaPredicted RBP17.51■□□□□ 0.39
PTCD3-210ENST00000473829 VWA5B2Q8N398 1253 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 CPSF7Q8N684 471 aaKnown RBP17.51■□□□□ 0.39
PTCD3-210ENST00000473829 ZNF441Q8N8Z8 693 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 DNAJB8Q8NHS0 232 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 FAM76AQ8TAV0 307 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 TMEM125Q96AQ2 219 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 EGLN2Q96KS0 407 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 BRINP2Q9C0B6 783 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 C20orf27Q9GZN8 174 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 OR10A5Q9H207 317 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 TMBIM4Q9HC24 238 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 DEPPQ9NTK1 212 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.51■□□□□ 0.39
PTCD3-210ENST00000473829 ZNF639Q9UID6 485 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 PSME2Q9UL46 239 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 ERVK-11Q9UQG0 969 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 DTX4Q9Y2E6 619 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 ZNF780BQ9Y6R6 833 aa17.51■□□□□ 0.39
PTCD3-210ENST00000473829 EXPH5Q8NEV8 1989 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms