RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	SLC18A2	Q05940	514 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	SPRED3	Q2MJR0	410 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	HIST2H2BC	Q6DN03	193 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	CLEC6A	Q6EIG7	209 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	SLC48A1	Q6P1K1	146 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	RTL4	Q6ZR62	310 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	FAM47E	Q6ZV65	393 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	TRABD2A	Q86V40	505 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	ARMC10	Q8N2F6	343 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	OR8K3	Q8NH51	312 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	CHTF18	Q8WVB6	975 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	EXOSC8	Q96B26	276 aa	Known RBP	13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	TM4SF18	Q96CE8	201 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	GPR137	Q96N19	417 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	GIMAP4	Q9NUV9	329 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	SLC17A7	Q9P2U7	560 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	MCM8	Q9UJA3	840 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	UTS2R	Q9UKP6	389 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880	DLGAP4	Q9Y2H0	992 aa		13.71	□□□□□ -0.21
SSR4-208	ENST00000471880		A0A1B0GUH1	482 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	C2orf92	A0A1B0GVN3	265 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	ASPDH	A6ND91	283 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	FAM166B	A8MTA8	275 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	ACOT7	O00154	380 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	CCL21	O00585	134 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	RGS16	O15492	202 aa	Predicted RBP	13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	ZNHIT1	O43257	154 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	HS6ST1	O60243	411 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	TRIM13	O60858	407 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	PDE9A	O76083	593 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	IGKV3-11	P04433	115 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	ANXA4	P09525	319 aa	Predicted RBP	13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	CSNK2A2	P19784	350 aa	Predicted RBP	13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	TIA1	P31483	386 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	NR0B1	P51843	470 aa	Known RBP	13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	PCLAF	Q15004	111 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	VWA5B2	Q8N398	1253 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	BANP	Q8N9N5	519 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	POGLUT1	Q8NBL1	392 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	ADCY4	Q8NFM4	1077 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	PPP1R14C	Q8TAE6	165 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	AGR3	Q8TD06	166 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	PSMG3-AS1	Q96PY0	264 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	MECR	Q9BV79	373 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	WWTR1	Q9GZV5	400 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	TRIM45	Q9H8W5	580 aa	Predicted RBP	13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	CXorf21	Q9HAI6	301 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	SACM1L	Q9NTJ5	587 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	SENP1	Q9P0U3	644 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	SUCO	Q9UBS9	1254 aa	Known RBP	13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	LGALS13	Q9UHV8	139 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	ENTPD4	Q9Y227	616 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	PLLP	Q9Y342	182 aa		13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	POLR3H	Q9Y535	204 aa	Predicted RBP	13.7	□□□□□ -0.22
SSR4-208	ENST00000471880	CACNA1D	Q01668	2161 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	OR6C76	A6NM76	312 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880		H3BQF6	201 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	ASNA1	O43681	348 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	ZNF354A	O60765	605 aa	Predicted RBP	13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	SLC19A2	O60779	497 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	LRAT	O95237	230 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	CHEK2	O96017	543 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	CT62	P0C5K7	136 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	UROS	P10746	265 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	ESRRA	P11474	423 aa	Predicted RBP	13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	ALDH3A1	P30838	453 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	SLC37A1	P57057	533 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	TRA2B	P62995	288 aa	Known RBP	13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	EXOSC7	Q15024	291 aa	Known RBP	13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	NNAT	Q16517	81 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	KRTCAP3	Q53RY4	240 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	PIGG	Q5H8A4	983 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	RNFT1	Q5M7Z0	435 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	PRAMEF20	Q5VT98	475 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	FAM111B	Q6SJ93	734 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	TMEM64	Q6YI46	380 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	ZCCHC23	Q6ZST2	131 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	DDIAS	Q8IXT1	998 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	TAGAP	Q8N103	731 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	GHDC	Q8N2G8	530 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	LRRC25	Q8N386	305 aa	Predicted RBP	13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	NUBPL	Q8TB37	319 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	TCP10L	Q8TDR4	215 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	C16orf78	Q8WTQ4	265 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	JSRP1	Q96MG2	331 aa	Predicted RBP	13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	BBS4	Q96RK4	519 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	GATA5	Q9BWX5	397 aa	Predicted RBP	13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	DEFB127	Q9H1M4	99 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	OR10A5	Q9H207	317 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	MIEF1	Q9NQG6	463 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	HEY2	Q9UBP5	337 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	PLEKHB1	Q9UF11	243 aa	Predicted RBP	13.69	□□□□□ -0.22
SSR4-208	ENST00000471880	ZNF407	Q9C0G0	2248 aa		13.69	□□□□□ -0.22
SSR4-208	ENST00000471880		A0A0G2JMM0	328 aa		13.68	□□□□□ -0.22
SSR4-208	ENST00000471880		A0A1W2PPB8	328 aa		13.68	□□□□□ -0.22
SSR4-208	ENST00000471880		A0A1W2PRS3	328 aa		13.68	□□□□□ -0.22
SSR4-208	ENST00000471880	KIR3DP1	A8MWS1	328 aa		13.68	□□□□□ -0.22
SSR4-208	ENST00000471880	AZIN1	O14977	448 aa		13.68	□□□□□ -0.22
SSR4-208	ENST00000471880	ZG16	O60844	167 aa		13.68	□□□□□ -0.22

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