RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 PRSS23O95084 383 aa8.81□□□□□ -1
VPS52-216ENST00000471309 BMP10O95393 424 aa8.81□□□□□ -1
VPS52-216ENST00000471309 IFNA14P01570 189 aa8.81□□□□□ -1
VPS52-216ENST00000471309 HMGN2P05204 90 aaKnown RBP8.81□□□□□ -1
VPS52-216ENST00000471309 TFPTP0C1Z6 253 aa8.81□□□□□ -1
VPS52-216ENST00000471309 ATP6V1C1P21283 382 aa8.81□□□□□ -1
VPS52-216ENST00000471309 ARSFP54793 590 aa8.81□□□□□ -1
VPS52-216ENST00000471309 ITGA1P56199 1179 aa8.81□□□□□ -1
VPS52-216ENST00000471309 IGLV3-21P80748 117 aaPredicted RBP8.81□□□□□ -1
VPS52-216ENST00000471309 DAB2P98082 770 aa8.81□□□□□ -1
VPS52-216ENST00000471309 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.81□□□□□ -1
VPS52-216ENST00000471309 CYBRD1Q53TN4 286 aa8.81□□□□□ -1
VPS52-216ENST00000471309 ZNF628Q5EBL2 1059 aa8.81□□□□□ -1
VPS52-216ENST00000471309 CRB2Q5IJ48 1285 aa8.81□□□□□ -1
VPS52-216ENST00000471309 PLA2G2CQ5R387 149 aa8.81□□□□□ -1
VPS52-216ENST00000471309 REEP3Q6NUK4 255 aa8.81□□□□□ -1
VPS52-216ENST00000471309 TNFAIP8L2Q6P589 184 aaPredicted RBP8.81□□□□□ -1
VPS52-216ENST00000471309 ZC3H14Q6PJT7 736 aaKnown RBP8.81□□□□□ -1
VPS52-216ENST00000471309 MED25Q71SY5 747 aa8.81□□□□□ -1
VPS52-216ENST00000471309 TMPRSS9Q7Z410 1059 aa8.81□□□□□ -1
VPS52-216ENST00000471309 SZRD1Q7Z422 152 aa8.81□□□□□ -1
VPS52-216ENST00000471309 AMIGO2Q86SJ2 522 aa8.81□□□□□ -1
VPS52-216ENST00000471309 PATL1Q86TB9 770 aaKnown RBP8.81□□□□□ -1
VPS52-216ENST00000471309 EPHX4Q8IUS5 362 aa8.81□□□□□ -1
VPS52-216ENST00000471309 ZNF595Q8IYB9 648 aa8.81□□□□□ -1
VPS52-216ENST00000471309 GPR135Q8IZ08 494 aa8.81□□□□□ -1
VPS52-216ENST00000471309 PACRGLQ8N7B6 248 aa8.81□□□□□ -1
VPS52-216ENST00000471309 OR7G2Q8NG99 324 aa8.81□□□□□ -1
VPS52-216ENST00000471309 OR1L3Q8NH93 324 aa8.81□□□□□ -1
VPS52-216ENST00000471309 IFI44Q8TCB0 444 aa8.81□□□□□ -1
VPS52-216ENST00000471309 ZNF675Q8TD23 568 aa8.81□□□□□ -1
VPS52-216ENST00000471309 ZNF501Q96CX3 271 aaPredicted RBP8.81□□□□□ -1
VPS52-216ENST00000471309 MMABQ96EY8 250 aaPredicted RBP8.81□□□□□ -1
VPS52-216ENST00000471309 TMEM19Q96HH6 336 aa8.81□□□□□ -1
VPS52-216ENST00000471309 HSH2DQ96JZ2 352 aa8.81□□□□□ -1
VPS52-216ENST00000471309 BDH2Q9BUT1 245 aa8.81□□□□□ -1
VPS52-216ENST00000471309 C9orf16Q9BUW7 83 aa8.81□□□□□ -1
VPS52-216ENST00000471309 ARRDC1-AS1Q9H2J1 176 aa8.81□□□□□ -1
VPS52-216ENST00000471309 OR51I1Q9H343 314 aa8.81□□□□□ -1
VPS52-216ENST00000471309 LRRN3Q9H3W5 708 aa8.81□□□□□ -1
VPS52-216ENST00000471309 FGF21Q9NSA1 209 aa8.81□□□□□ -1
VPS52-216ENST00000471309 CUTCQ9NTM9 273 aa8.81□□□□□ -1
VPS52-216ENST00000471309 DDX18Q9NVP1 670 aaKnown RBP8.81□□□□□ -1
VPS52-216ENST00000471309 HCN3Q9P1Z3 774 aa8.81□□□□□ -1
VPS52-216ENST00000471309 P2RX2Q9UBL9 471 aa8.81□□□□□ -1
VPS52-216ENST00000471309 CDC14AQ9UNH5 594 aa8.81□□□□□ -1
VPS52-216ENST00000471309 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.8□□□□□ -1
VPS52-216ENST00000471309 C5orf58C9J3I9 102 aa8.8□□□□□ -1
VPS52-216ENST00000471309 FAM227AF5H4B4 570 aa8.8□□□□□ -1
VPS52-216ENST00000471309 UPK1AO00322 258 aa8.8□□□□□ -1
VPS52-216ENST00000471309 CLOCKO15516 846 aa8.8□□□□□ -1
VPS52-216ENST00000471309 ZNF749O43361 778 aa8.8□□□□□ -1
VPS52-216ENST00000471309 SUV39H1O43463 412 aa8.8□□□□□ -1
VPS52-216ENST00000471309 PLOD3O60568 738 aa8.8□□□□□ -1
VPS52-216ENST00000471309 CTNSO60931 367 aa8.8□□□□□ -1
VPS52-216ENST00000471309 LDB3O75112 727 aa8.8□□□□□ -1
VPS52-216ENST00000471309 PDE9AO76083 593 aa8.8□□□□□ -1
VPS52-216ENST00000471309 MT-ND1P03886 318 aa8.8□□□□□ -1
VPS52-216ENST00000471309 BCHEP06276 602 aa8.8□□□□□ -1
VPS52-216ENST00000471309 SLC35E2P0CK97 266 aa8.8□□□□□ -1
VPS52-216ENST00000471309 FOLR1P15328 257 aa8.8□□□□□ -1
VPS52-216ENST00000471309 ZNF26P17031 533 aaPredicted RBP8.8□□□□□ -1
VPS52-216ENST00000471309 MATN1P21941 496 aa8.8□□□□□ -1
VPS52-216ENST00000471309 AQP1P29972 269 aa8.8□□□□□ -1
VPS52-216ENST00000471309 PTGER1P34995 402 aa8.8□□□□□ -1
VPS52-216ENST00000471309 GRK6P43250 576 aa8.8□□□□□ -1
VPS52-216ENST00000471309 HSPA13P48723 471 aa8.8□□□□□ -1
VPS52-216ENST00000471309 CLCN2P51788 898 aa8.8□□□□□ -1
VPS52-216ENST00000471309 AQP4P55087 323 aa8.8□□□□□ -1
VPS52-216ENST00000471309 HSD17B7P56937 341 aa8.8□□□□□ -1
VPS52-216ENST00000471309 SELENOWP63302 87 aa8.8□□□□□ -1
VPS52-216ENST00000471309 CCL7P80098 99 aa8.8□□□□□ -1
VPS52-216ENST00000471309 ACY1Q03154 408 aa8.8□□□□□ -1
VPS52-216ENST00000471309 GNA13Q14344 377 aa8.8□□□□□ -1
VPS52-216ENST00000471309 LASP1Q14847 261 aaKnown RBP8.8□□□□□ -1
VPS52-216ENST00000471309 SFT2D3Q587I9 215 aa8.8□□□□□ -1
VPS52-216ENST00000471309 SNAP47Q5SQN1 464 aa8.8□□□□□ -1
VPS52-216ENST00000471309 FHL5Q5TD97 284 aa8.8□□□□□ -1
VPS52-216ENST00000471309 PRAMEF8Q5VWM4 474 aa8.8□□□□□ -1
VPS52-216ENST00000471309 PRAMEF7Q5VXH5 474 aa8.8□□□□□ -1
VPS52-216ENST00000471309 LAIR1Q6GTX8 287 aa8.8□□□□□ -1
VPS52-216ENST00000471309 TCEAL6Q6IPX3 200 aa8.8□□□□□ -1
VPS52-216ENST00000471309 MFSD12Q6NUT3 480 aa8.8□□□□□ -1
VPS52-216ENST00000471309 FAM111BQ6SJ93 734 aa8.8□□□□□ -1
VPS52-216ENST00000471309 ZNF574Q6ZN55 896 aaPredicted RBP8.8□□□□□ -1
VPS52-216ENST00000471309 PIWIL3Q7Z3Z3 882 aaKnown RBP8.8□□□□□ -1
VPS52-216ENST00000471309 ARHGAP22Q7Z5H3 698 aa8.8□□□□□ -1
VPS52-216ENST00000471309 GALNT10Q86SR1 603 aa8.8□□□□□ -1
VPS52-216ENST00000471309 ZC3H7AQ8IWR0 971 aaKnown RBP8.8□□□□□ -1
VPS52-216ENST00000471309 OR4N5Q8IXE1 308 aa8.8□□□□□ -1
VPS52-216ENST00000471309 SHISA5Q8N114 240 aa8.8□□□□□ -1
VPS52-216ENST00000471309 ICA1LQ8NDH6 482 aa8.8□□□□□ -1
VPS52-216ENST00000471309 NUP43Q8NFH3 380 aa8.8□□□□□ -1
VPS52-216ENST00000471309 BBS10Q8TAM1 723 aa8.8□□□□□ -1
VPS52-216ENST00000471309 SLC38A5Q8WUX1 472 aa8.8□□□□□ -1
VPS52-216ENST00000471309 LZICQ8WZA0 190 aa8.8□□□□□ -1
VPS52-216ENST00000471309 KAT2AQ92830 837 aa8.8□□□□□ -1
VPS52-216ENST00000471309 RAB8BQ92930 207 aa8.8□□□□□ -1
VPS52-216ENST00000471309 TCEAL3Q969E4 200 aa8.8□□□□□ -1
VPS52-216ENST00000471309 ANKRD9Q96BM1 317 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms