RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 TRIML2Q8N7C3 387 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 LSM14AQ8ND56 463 aaKnown RBP6.26□□□□□ -1.41
VAMP3-202ENST00000470357 CLHC1Q8NHS4 586 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 TM4SF18Q96CE8 201 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 LRRC58Q96CX6 371 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 ZBED6CLQ96FA7 236 aaPredicted RBP6.26□□□□□ -1.41
VAMP3-202ENST00000470357 SMIM10Q96HG1 83 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 EGLN2Q96KS0 407 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 TEX37Q96LM6 180 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 PPM1MQ96MI6 270 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 GBP5Q96PP8 586 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 TEFMQ96QE5 360 aaKnown RBP6.26□□□□□ -1.41
VAMP3-202ENST00000470357 NDC1Q9BTX1 674 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 KLHL25Q9H0H3 589 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 KLHL31Q9H511 634 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 FAM60AQ9NP50 221 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 SPAG4Q9NPE6 437 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 SLC52A3Q9NQ40 469 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 SH3BP4Q9P0V3 963 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 KLHL3Q9UH77 587 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 BTNL2Q9UIR0 455 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 CORO2BQ9UQ03 480 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 MRPS33Q9Y291 106 aaKnown RBP6.26□□□□□ -1.41
VAMP3-202ENST00000470357 MAN2B2Q9Y2E5 1009 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 RRP15Q9Y3B9 282 aaKnown RBP6.26□□□□□ -1.41
VAMP3-202ENST00000470357 PCDHGA1Q9Y5H4 931 aa6.26□□□□□ -1.41
VAMP3-202ENST00000470357 COL12A1Q99715 3063 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 SCN2AQ99250 2005 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 A0A1W2PQM1 296 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 HYKKA2RU49 373 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 FAM149AA5PLN7 773 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 GABRR3A8MPY1 467 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 EVPLLA8MZ36 301 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 TMEM150CB9EJG8 249 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 H0YIG0 161 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 RTCAO00442 366 aaKnown RBP6.25□□□□□ -1.41
VAMP3-202ENST00000470357 NTN3O00634 580 aaPredicted RBP6.25□□□□□ -1.41
VAMP3-202ENST00000470357 FBP2O00757 339 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 RFXANKO14593 260 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 P2RX6O15547 441 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 KIF1CO43896 1103 aaKnown RBP6.25□□□□□ -1.41
VAMP3-202ENST00000470357 TMPRSS11DO60235 418 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 GALR3O60755 368 aaPredicted RBP6.25□□□□□ -1.41
VAMP3-202ENST00000470357 CIB2O75838 187 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 KLHL18O94889 574 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 LRATO95237 230 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 BMP10O95393 424 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 NSA2O95478 260 aaKnown RBP6.25□□□□□ -1.41
VAMP3-202ENST00000470357 ANP32DO95626 131 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 ZCCHC18P0CG32 403 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 NR2F6P10588 404 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 RNH1P13489 461 aaKnown RBP6.25□□□□□ -1.41
VAMP3-202ENST00000470357 NQO1P15559 274 aaKnown RBP6.25□□□□□ -1.41
VAMP3-202ENST00000470357 ITGAXP20702 1163 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 IL10P22301 178 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 CPN2P22792 545 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 CERS1P27544 350 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 IL12AP29459 219 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 NTSP30990 170 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 CSTF2P33240 577 aaKnown RBP eCLIP6.25□□□□□ -1.41
VAMP3-202ENST00000470357 MAGEA8P43361 318 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 ZFP36L2P47974 494 aaKnown RBP6.25□□□□□ -1.41
VAMP3-202ENST00000470357 GABRA4P48169 554 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 DGKQP52824 942 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 CORO7P57737 925 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 RAB8AP61006 207 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 PSME3P61289 254 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 TNFRSF17Q02223 184 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 BIKQ13323 160 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 IL11RAQ14626 422 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 MLC1Q15049 377 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 UGT8Q16880 541 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 DEFB134Q4QY38 66 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 C6orf10Q5SRN2 563 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 LRIF1Q5T3J3 769 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 NDUFAF5Q5TEU4 345 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 FAM219BQ5XKK7 198 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 OR52E8Q6IFG1 317 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 RBM44Q6ZP01 1051 aaKnown RBP6.25□□□□□ -1.41
VAMP3-202ENST00000470357 RINLQ6ZS11 566 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 ARHGAP22Q7Z5H3 698 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 ZNF605Q86T29 641 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 TICAM1Q8IUC6 712 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 SCUBE1Q8IWY4 988 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 DEFB107AQ8IZN7 70 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 FAM47BQ8NA70 645 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 AGBL5Q8NDL9 886 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 TNIP2Q8NFZ5 429 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 OR7A2PQ8NGA2 310 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 OR8J3Q8NGG0 315 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 ZCCHC10Q8TBK6 192 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 POP5Q969H6 163 aaKnown RBP6.25□□□□□ -1.41
VAMP3-202ENST00000470357 GFM2Q969S9 779 aaKnown RBP6.25□□□□□ -1.41
VAMP3-202ENST00000470357 VPS33AQ96AX1 596 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 CCDC115Q96NT0 180 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 FCRL4Q96PJ5 515 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 PANX1Q96RD7 426 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 NPAS2Q99743 824 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 NUDT22Q9BRQ3 303 aa6.25□□□□□ -1.41
VAMP3-202ENST00000470357 THTPAQ9BU02 230 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms