RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 ANKRD33BA6NCL7 494 aa16.08■□□□□ 0.16
COL7A1-208ENST00000470076 LRRC3CA6NJW4 275 aa16.08■□□□□ 0.16
COL7A1-208ENST00000470076 WASHC1A8K0Z3 465 aa16.08■□□□□ 0.16
COL7A1-208ENST00000470076 CAPN14A8MX76 684 aa16.08■□□□□ 0.16
COL7A1-208ENST00000470076 SIX3O95343 332 aaPredicted RBP16.08■□□□□ 0.16
COL7A1-208ENST00000470076 ENDOUP21128 410 aaKnown RBP16.08■□□□□ 0.16
COL7A1-208ENST00000470076 NEK2P51955 445 aa16.08■□□□□ 0.16
COL7A1-208ENST00000470076 SLC25A35Q3KQZ1 300 aa16.08■□□□□ 0.16
COL7A1-208ENST00000470076 TECRLQ5HYJ1 363 aa16.08■□□□□ 0.16
COL7A1-208ENST00000470076 C10orf62Q5T681 223 aaPredicted RBP16.08■□□□□ 0.16
COL7A1-208ENST00000470076 SYT10Q6XYQ8 523 aa16.08■□□□□ 0.16
COL7A1-208ENST00000470076 ATP6V1E2Q96A05 226 aa16.08■□□□□ 0.16
COL7A1-208ENST00000470076 TP53INP1Q96A56 240 aa16.08■□□□□ 0.16
COL7A1-208ENST00000470076 DOHHQ9BU89 302 aa16.08■□□□□ 0.16
COL7A1-208ENST00000470076 ACSS3Q9H6R3 686 aa16.08■□□□□ 0.16
COL7A1-208ENST00000470076 CXorf21Q9HAI6 301 aa16.08■□□□□ 0.16
COL7A1-208ENST00000470076 ZDHHC18Q9NUE0 388 aa16.08■□□□□ 0.16
COL7A1-208ENST00000470076 ALKBH4Q9NXW9 302 aa16.08■□□□□ 0.16
COL7A1-208ENST00000470076 CNOT11Q9UKZ1 510 aaKnown RBP16.08■□□□□ 0.16
COL7A1-208ENST00000470076 C2orf92A0A1B0GVN3 265 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 ESYT3A0FGR9 886 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 TP53I11O14683 189 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 CLPSP04118 112 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 PIK3R1P27986 724 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 ADH7P40394 386 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 ARL1P40616 181 aaPredicted RBP16.07■□□□□ 0.16
COL7A1-208ENST00000470076 SLC7A5Q01650 507 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 MYBPHQ13203 477 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 RIPPLY2Q5TAB7 128 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 C8orf74Q6P047 294 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 TMEM200AQ86VY9 491 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 GALNT12Q8IXK2 581 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 LIX1Q8N485 282 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 PTGR2Q8N8N7 351 aaPredicted RBP16.07■□□□□ 0.16
COL7A1-208ENST00000470076 ZNF441Q8N8Z8 693 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 NEIL3Q8TAT5 605 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 ZNF597Q96LX8 424 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 JSRP1Q96MG2 331 aaPredicted RBP16.07■□□□□ 0.16
COL7A1-208ENST00000470076 VPS11Q9H270 941 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 NOL11Q9H8H0 719 aaKnown RBP16.07■□□□□ 0.16
COL7A1-208ENST00000470076 TMCO1Q9UM00 188 aa16.07■□□□□ 0.16
COL7A1-208ENST00000470076 OR7A17O14581 309 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 PGRMC2O15173 223 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 GBAP04062 536 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 RBP1P09455 135 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 SSTR4P31391 388 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 TMED10P49755 219 aaKnown RBP16.06■□□□□ 0.16
COL7A1-208ENST00000470076 CCNG1P51959 295 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 CKAP4Q07065 602 aaKnown RBP16.06■□□□□ 0.16
COL7A1-208ENST00000470076 RPS6KA2Q15349 733 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 HLA-DQA1Q5Y7H0 255 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 FRG2Q64ET8 278 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 TMEM198Q66K66 360 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 LIX1LQ8IVB5 337 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 ULK2Q8IYT8 1036 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 OR52B6Q8NGF0 335 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 DIO2Q92813 273 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 CDK15Q96Q40 435 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 FRG2BQ96QU4 278 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 SECISBP2Q96T21 854 aaKnown RBP16.06■□□□□ 0.16
COL7A1-208ENST00000470076 NTMT1Q9BV86 223 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 SLC6A15Q9H2J7 730 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 TEX10Q9NXF1 929 aaPredicted RBP16.06■□□□□ 0.16
COL7A1-208ENST00000470076 AHSPQ9NZD4 102 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 MAP1AP78559 2803 aaPredicted RBP16.06■□□□□ 0.16
COL7A1-208ENST00000470076 ITPR3Q14573 2671 aa16.06■□□□□ 0.16
COL7A1-208ENST00000470076 STX16-NPEPL1H3BU86 382 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 STX16O14662 325 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 TRIM3O75382 744 aaPredicted RBP16.05■□□□□ 0.16
COL7A1-208ENST00000470076 SNX4O95219 450 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 ZWINTO95229 277 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 GDF1P27539 372 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 NRG3P56975 720 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 FUT7Q11130 342 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 C6orf163Q5TEZ5 329 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 TTC19Q6DKK2 380 aaPredicted RBP16.05■□□□□ 0.16
COL7A1-208ENST00000470076 PAGE2Q7Z2X7 111 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 RELL1Q8IUW5 271 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 PLD6Q8N2A8 252 aaKnown RBP16.05■□□□□ 0.16
COL7A1-208ENST00000470076 OR4K14Q8NGD5 310 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 UCN3Q969E3 161 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 ISL2Q96A47 359 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 PHF21BQ96EK2 531 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 LRRC1Q9BTT6 524 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 FUT8Q9BYC5 575 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 NINJ2Q9NZG7 142 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 ADAM29Q9UKF5 820 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 PCTPQ9UKL6 214 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 L3MBTL1Q9Y468 752 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 NPFFR2Q9Y5X5 522 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 IKBKGQ9Y6K9 419 aa16.05■□□□□ 0.16
COL7A1-208ENST00000470076 EXPH5Q8NEV8 1989 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 A0A1W2PS29 197 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 HSPB2A8KAH6 182 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 SMIM24O75264 130 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 LRATO95237 230 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 INHBAP08476 426 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 CD1EP15812 388 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 MAGEA12P43365 314 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 TRPC1P48995 793 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms