RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 COG3Q96JB2 828 aa4.2□□□□□ -1.74
LSM5-209ENST00000468872 SAMD8Q96LT4 415 aa4.2□□□□□ -1.74
LSM5-209ENST00000468872 TNFRSF13CQ96RJ3 184 aa4.2□□□□□ -1.74
LSM5-209ENST00000468872 DCTN5Q9BTE1 182 aa4.2□□□□□ -1.74
LSM5-209ENST00000468872 KRT23Q9C075 422 aa4.2□□□□□ -1.74
LSM5-209ENST00000468872 NMUR1Q9HB89 426 aa4.2□□□□□ -1.74
LSM5-209ENST00000468872 SLC25A19Q9HC21 320 aa4.2□□□□□ -1.74
LSM5-209ENST00000468872 NUDT4Q9NZJ9 180 aa4.2□□□□□ -1.74
LSM5-209ENST00000468872 VPS54Q9P1Q0 977 aa4.2□□□□□ -1.74
LSM5-209ENST00000468872 HOOK1Q9UJC3 728 aaKnown RBP4.2□□□□□ -1.74
LSM5-209ENST00000468872 PLEKHA6Q9Y2H5 1048 aa4.2□□□□□ -1.74
LSM5-209ENST00000468872 AFF2P51816 1311 aa4.2□□□□□ -1.74
LSM5-209ENST00000468872 PKD1L2Q7Z442 2459 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 MYH15Q9Y2K3 1946 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 PCNTO95613 3336 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 TRBV5-4A0A0C4DH59 114 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 SOCS3O14543 225 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 ADAM12O43184 909 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 OR6B1O95007 311 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 ZCCHC18P0CG32 403 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 PRDX6P30041 224 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 RPL9P32969 192 aaKnown RBP4.19□□□□□ -1.74
LSM5-209ENST00000468872 ACADSBP45954 432 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 CAMLGP49069 296 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 FKBP3Q00688 224 aaKnown RBP4.19□□□□□ -1.74
LSM5-209ENST00000468872 CARTPTQ16568 116 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 ZNF613Q6PF04 617 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 CDHR3Q6ZTQ4 885 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 GET4Q7L5D6 327 aaPredicted RBP4.19□□□□□ -1.74
LSM5-209ENST00000468872 SPPL2AQ8TCT8 520 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 NABP1Q96AH0 204 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 MOCOSQ96EN8 888 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 LINC00479Q96M42 142 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 MCRIP2Q9BUT9 160 aaKnown RBP4.19□□□□□ -1.74
LSM5-209ENST00000468872 FTHL17Q9BXU8 183 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 WDR41Q9HAD4 459 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 HPS4Q9NQG7 708 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 HOMER3Q9NSC5 361 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 SOHLH2Q9NX45 425 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 NIP7Q9Y221 180 aaKnown RBP eCLIP4.19□□□□□ -1.74
LSM5-209ENST00000468872 VWDEQ8N2E2 1590 aa4.19□□□□□ -1.74
LSM5-209ENST00000468872 FANCAO15360 1455 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 JCADQ9P266 1359 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 NINLQ9Y2I6 1382 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 ARHGEF33A8MVX0 844 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 MEI4A8MW99 385 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 TMCO5BA8MYB1 307 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 NEDD8-MDP1E9PL57 170 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 FBP2O00757 339 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 PTBP3O95758 552 aaKnown RBP4.18□□□□□ -1.74
LSM5-209ENST00000468872 PDGFBP01127 241 aaPredicted RBP4.18□□□□□ -1.74
LSM5-209ENST00000468872 PROS1P07225 676 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 APRTP07741 180 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 HIST1H2AGP0C0S8 130 aaPredicted RBP4.18□□□□□ -1.74
LSM5-209ENST00000468872 ADORA3P0DMS8 318 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 GNSP15586 552 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 RPS4XP62701 263 aaKnown RBP4.18□□□□□ -1.74
LSM5-209ENST00000468872 ITPK1Q13572 414 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 KLF5Q13887 457 aaPredicted RBP4.18□□□□□ -1.74
LSM5-209ENST00000468872 SMC1AQ14683 1233 aaKnown RBP4.18□□□□□ -1.74
LSM5-209ENST00000468872 KARSQ15046 597 aaKnown RBP4.18□□□□□ -1.74
LSM5-209ENST00000468872 ZNF146Q15072 292 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 ECSCRQ19T08 205 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 ZNF528Q3MIS6 628 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 C2CD6Q53TS8 623 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 RBM43Q6ZSC3 357 aaKnown RBP4.18□□□□□ -1.74
LSM5-209ENST00000468872 YRDCQ86U90 279 aaKnown RBP4.18□□□□□ -1.74
LSM5-209ENST00000468872 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.18□□□□□ -1.74
LSM5-209ENST00000468872 LRRC17Q8N6Y2 441 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 CHDHQ8NE62 594 aaPredicted RBP4.18□□□□□ -1.74
LSM5-209ENST00000468872 HIST1H2ACQ93077 130 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 TMEM45BQ96B21 275 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 C18orf12Q96KH6 178 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 RCHY1Q96PM5 261 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 CBWD1Q9BRT8 395 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 ERVK-18Q9QC07 812 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 CLIP2Q9UDT6 1046 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 IL20RAQ9UHF4 553 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 KLHDC2Q9Y2U9 406 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 CLCA3PQ9Y6N3 262 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 CUL7Q14999 1698 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 ABCC8Q09428 1581 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 NWD1Q149M9 1564 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 FRMPD1Q5SYB0 1578 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 UBE4BO95155 1302 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 ZMYM6O95789 1325 aa4.18□□□□□ -1.74
LSM5-209ENST00000468872 TCOF1Q13428 1488 aaKnown RBP4.18□□□□□ -1.74
LSM5-209ENST00000468872 SCAF11Q99590 1463 aaKnown RBP4.18□□□□□ -1.74
LSM5-209ENST00000468872 RNF17Q9BXT8 1623 aaKnown RBP4.17□□□□□ -1.74
LSM5-209ENST00000468872 ARHGEF12Q9NZN5 1544 aa4.17□□□□□ -1.74
LSM5-209ENST00000468872 EPM2AB3EWF7 344 aa4.17□□□□□ -1.74
LSM5-209ENST00000468872 K7EQG2 157 aa4.17□□□□□ -1.74
LSM5-209ENST00000468872 SH2D1BO14796 132 aa4.17□□□□□ -1.74
LSM5-209ENST00000468872 TSPAN2O60636 221 aa4.17□□□□□ -1.74
LSM5-209ENST00000468872 B3GALNT1O75752 331 aa4.17□□□□□ -1.74
LSM5-209ENST00000468872 FCER2P06734 321 aa4.17□□□□□ -1.74
LSM5-209ENST00000468872 MBL2P11226 248 aaPredicted RBP4.17□□□□□ -1.74
LSM5-209ENST00000468872 DPEP1P16444 411 aa4.17□□□□□ -1.74
LSM5-209ENST00000468872 NDUFV3P56181 108 aaKnown RBP4.17□□□□□ -1.74
LSM5-209ENST00000468872 CLPPQ16740 277 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms