RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 SFXN2Q96NB2 322 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 OR2B2Q9GZK3 357 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 BPESC1Q9GZL8 116 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 ACTR8Q9H981 624 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.25□□□□□ -0.614e-8■■□□□ 12.2
UBR4-210ENST00000466969 ZFP69BQ9UJL9 534 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 MYO6Q9UM54 1294 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 PMF1-BGLAPU3KQ54 211 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 SCAMP2O15127 329 aaKnown RBP11.24□□□□□ -0.61
UBR4-210ENST00000466969 CST8O60676 142 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 SMIM10L1P0DMW3 83 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 SAT1P21673 171 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 TMED10P49755 219 aaKnown RBP11.24□□□□□ -0.61
UBR4-210ENST00000466969 CHN2P52757 468 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 CDH15P55291 814 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 EEFSECP57772 596 aaKnown RBP11.24□□□□□ -0.61
UBR4-210ENST00000466969 PRAMEP78395 509 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 UBXN1Q04323 297 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 KLHL30Q0D2K2 578 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 RUNX2Q13950 521 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 TAB1Q15750 504 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 GLCCI1Q86VQ1 547 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 LRRC6Q86X45 466 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 CCDC50Q8IVM0 306 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 ZDHHC22Q8N966 263 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 OR13J1Q8NGT2 312 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 PIWIL2Q8TC59 973 aaKnown RBP11.24□□□□□ -0.61
UBR4-210ENST00000466969 SMIM10Q96HG1 83 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 SENP5Q96HI0 755 aaPredicted RBP11.24□□□□□ -0.61
UBR4-210ENST00000466969 DHRS9Q9BPW9 319 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 NPLQ9BXD5 320 aaPredicted RBP11.24□□□□□ -0.61
UBR4-210ENST00000466969 PINK1Q9BXM7 581 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 HDHD5Q9BXW7 423 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 P2RY12Q9H244 342 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 TAS2R10Q9NYW0 307 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 LIMA1Q9UHB6 759 aaKnown RBP11.24□□□□□ -0.61
UBR4-210ENST00000466969 POU2F3Q9UKI9 436 aa11.24□□□□□ -0.61
UBR4-210ENST00000466969 TRBC2A0A5B9 178 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 LRRC53A6NM62 1247 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 M0QZ24 198 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 ZBTB14O43829 449 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 CBR3O75828 277 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 IL32P24001 234 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 RBL1P28749 1068 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 NEK2P51955 445 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 CHRNB3Q05901 458 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 GBX1Q14549 363 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 KCNJ11Q14654 390 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 EFTUD2Q15029 972 aaKnown RBP eCLIP11.23□□□□□ -0.615e-14■■■■□ 22
UBR4-210ENST00000466969 SETDB1Q15047 1291 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 GUSBP1Q15486 140 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 BCL2A1Q16548 175 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 ACSBG2Q5FVE4 666 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 ZNF793Q6ZN11 406 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 ZNF534Q76KX8 674 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 STRA8Q7Z7C7 330 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 CCDC25Q86WR0 208 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 FNDC9Q8TBE3 224 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 FAM136AQ96C01 138 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 HAUS1Q96CS2 278 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 RADILQ96JH8 1075 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 KLHL31Q9H511 634 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 METTL7AQ9H8H3 244 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 MYOZ1Q9NP98 299 aaPredicted RBP11.23□□□□□ -0.61
UBR4-210ENST00000466969 ESM1Q9NQ30 184 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 SERHLQ9NQF3 203 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 PIH1D1Q9NWS0 290 aaKnown RBP11.23□□□□□ -0.61
UBR4-210ENST00000466969 CTTNBP2NLQ9P2B4 639 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 LCMT1Q9UIC8 334 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 RYR2Q92736 4967 aa11.23□□□□□ -0.61
UBR4-210ENST00000466969 H7C0C1 242 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 ABCD4O14678 606 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 NDUFS3O75489 264 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 TNFRSF21O75509 655 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 BCL10O95999 233 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 PLGP00747 810 aaPredicted RBP11.22□□□□□ -0.61
UBR4-210ENST00000466969 NUDT17P0C025 328 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 IL2RGP31785 369 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 ATP5OP48047 213 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 FABP6P51161 128 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 CTBP2P56545 445 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 RCN2Q14257 317 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 PON3Q15166 354 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 TOR1AIP1Q5JTV8 583 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 TRIM40Q6P9F5 258 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 FIGNL1Q6PIW4 674 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 TMEM64Q6YI46 380 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 HSCBQ8IWL3 235 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 REXO1L1PQ8IX06 675 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 TEX29Q8N6K0 151 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 TRPV3Q8NET8 790 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 DTNBP1Q96EV8 351 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 TRMOQ9BU70 441 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 CATSPERZQ9NTU4 200 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 PLCE1Q9P212 2302 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 KLHL21Q9UJP4 597 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 ZNF175Q9Y473 711 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 SPEF1Q9Y4P9 236 aa11.22□□□□□ -0.61
UBR4-210ENST00000466969 A0A088AWK7 358 aa11.21□□□□□ -0.61
UBR4-210ENST00000466969 IQANK1A0A1B0GTG1 560 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms